[pygr-notify] Issue 79 in pygr: Multi-sequence blast support

codesite-noreply at google.com codesite-noreply at google.com
Tue Mar 31 09:10:19 PDT 2009


Comment #5 on issue 79 by cjlee112: Multi-sequence blast support
http://code.google.com/p/pygr/issues/detail?id=79

Hi Alex,
I think you figured it out: RecentValueDictionary doesn't seem to be safe  
for
multiple threads.  This also explains why the problem only arose with your  
larger
dataset; it   maintains a default cache size of 50 sequences.  Unless you  
process at
least 50 sequences, you won't encounter its cache-clearing mechanism.

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