[pygr-notify] Issue 76 in pygr: cannot create an annotation object of a current ensembl feature table

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Status: New
Owner: jqian.ubc
CC: cjlee112
Labels: Type-Defect Priority-High

New issue 76 by jqian.ubc: cannot create an annotation object of a current  
ensembl feature table
http://code.google.com/p/pygr/issues/detail?id=76

What steps will reproduce the problem?

Please see the attached script.

Error message:
qing at 1[ensembl]$ python issue76.py
Traceback (most recent call last):
   File "issue76.py", line 37, in <module>
     orientation='seq_region_strand'))
   File "/home/qing/workspace2009/pyensembl/pygr/seqdb.py", line 507, in
__init__
     (repr(seqDB),))
KeyError: ' cannot create annotation object; sequence database {} may not
be correct'



Attachments:
	issue76.py  3.4 KB

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