[pygr-notify] Issue 13 in pygr: support for gzipped file: NLMSABuilder, textfile_to_binaries, and dump_textfile
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codesite-noreply at google.com
Sun Jun 1 05:14:55 PDT 2008
Issue 13: support for gzipped file: NLMSABuilder, textfile_to_binaries,
and dump_textfile
http://code.google.com/p/pygr/issues/detail?id=13
New issue report by deepreds:
Text dump files from pre-built NLMSAs (available at
http://biodb.bioinformagtics.ucla.edu/PYGRDATA) are extremely large. In
total, if we uncompress them, it would be about 900GB.
I propose gzipped file support for three classes, NLMSABuilder,
textfile_to_binaries, and dump_textfile. In that way, we can save disk
space. Maybe we could give one option, compressed = True (or False) to
work with gzipped archives.
Issue attributes:
Status: New
Owner: deepreds
Labels: Type-Enhancement Priority-Medium
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