[pygr-notify] [pygr commit] r65 - wiki

[codesite-noreply at google.com]

Author: jqian.ubc
Date: Wed Jul  2 14:14:58 2008
New Revision: 65

Modified:
   wiki/PygrOnEnsembl.wiki

Log:
Edited wiki page through web user interface.

Modified: wiki/PygrOnEnsembl.wiki
==============================================================================
--- wiki/PygrOnEnsembl.wiki	(original)
+++ wiki/PygrOnEnsembl.wiki	Wed Jul  2 14:14:58 2008
@@ -101,6 +101,10 @@

   - Gene: `getTranscripts()`, `getExons()`, `getTranslations()`

+  - Transcript: `getExons()`
+
+  - Translation: `getExons()`
+
   feature method in adaptor.py:

   - TranscriptAdaptor: `fetch_transcripts_by_geneID(gene_id)`
@@ -126,9 +130,15 @@

 = Updates =

-*1.* mini-release upgraded to v0.02
+*1.* mini-release upgraded to v0.03

  ensemblv0.02.tar.gz at 
[http://groups.google.com/group/pygr-dev/files?hl=en: pygr-dev files] 
(running environment: the latest pygr.  For detailed information on how 
to get a copy of it, please go to 
[http://code.google.com/p/pygr/wiki/ViewSource ViewSouce])
+
+Alternatively, the current ensembl API code, together with pygr, can 
be retrieved from the public git repository.  To check out a copy, run 
the following instruction on the command line:
+
+`git clone git://iorich.caltech.edu/git/public/pygr-jenny <dirname of 
your choice>`
+
+(More information on Git can be found at 
[http://code.google.com/p/pygr/wiki/UsingGit UsingGit])

 *2.* the test output files