[khmer] khmer users, and citations.

[C. Titus Brown]

On Wed, Jun 03, 2015 at 07:20:26AM -0700, Erich Schwarz wrote:
> On Wed, 3 Jun 2015, C. Titus Brown wrote:
> 
> > I?m putting together a renewal request for the main khmer funding 
> > (NIH R01), and so I?m gathering information on users and 
> > citations.
> >
> > 2. I?ve been updating citation information, and I?d appreciate 
> > pointers to any papers you know of that have used khmer.
> 
> Two citations that I didn't find in your list:
> 
> 1. Schwarz et al. (2013): major, crucial use of khmer to allow 
> assembly of noisy genomic data; has you et al. as coauthors!
> 
>     http://www.ncbi.nlm.nih.gov/pubmed/23985341
> 
> 2. Schwarz et al. (2015): used khmer to allow RNA-scaffolding with 
> large RNA-seq data sets (RNA-scaffolding did not work unless khmer 
> was first used to filter the RNA-seq reads, though the details had 
> to be buried in a large Supplemental Materials text).
> 
>     http://www.ncbi.nlm.nih.gov/pubmed/25730766

Thanks!

(Conclusion: I'm clearly shite at finding citations.)

--titus
-- 
C. Titus Brown, ctbrown at ucdavis.edu