[pygr-notify] Issue 136 in pygr: Is the UCLA metabase database down?

[pygr at googlecode.com]

Status: New
Owner: pygr-bug... at googlegroups.com
Labels: Type-Defect Priority-Medium

New issue 136 by els... at gmail.com: Is the UCLA metabase database down?
http://code.google.com/p/pygr/issues/detail?id=136

After imputting:
import pygr
from pygr import worldbase
dir(worldbase)

I see:
Traceback (most recent call last):
    
File "C:\Python27\lib\site-packages\pygr-0.8.2-py2.7-win32.egg\pygr\metabase.py",  
line 1085, in update
     self, **mdbArgs)
    
File "C:\Python27\lib\site-packages\pygr-0.8.2-py2.7-win32.egg\pygr\metabase.py",  
line 915, in __init__
     storage = XMLRPCMetabase(dbpath, self, **kwargs)
    
File "C:\Python27\lib\site-packages\pygr-0.8.2-py2.7-win32.egg\pygr\metabase.py",  
line 335, in __init__
     self.server = get_connection(url, 'index')
    
File "C:\Python27\lib\site-packages\pygr-0.8.2-py2.7-win32.egg\pygr\coordinator.py",  
line 94, in __call__
     return s[name] # GET THE REQUESTED OBJECT PROXY FROM THE SERVER
    
File "C:\Python27\lib\site-packages\pygr-0.8.2-py2.7-win32.egg\pygr\coordinator.py",  
line 75, in __getitem__
     methodDict = self.server.objectInfo(name)
   File "C:\Python27\lib\xmlrpclib.py", line 1224, in __call__
     return self.__send(self.__name, args)
   File "C:\Python27\lib\xmlrpclib.py", line 1575, in __request
     verbose=self.__verbose
   File "C:\Python27\lib\xmlrpclib.py", line 1264, in request
     return self.single_request(host, handler, request_body, verbose)
   File "C:\Python27\lib\xmlrpclib.py", line 1294, in single_request
     response = h.getresponse(buffering=True)
   File "C:\Python27\lib\httplib.py", line 1027, in getresponse
     response.begin()
error: [Errno 10060] A connection attempt failed because the connected  
party did
  not properly respond after a period of time, or established connection  
failed because connected host has failed to respond

WARNING: error accessing metabase  
http://biodb2.bioinformatics.ucla.edu:5000.  Continuing...
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