[pygr-notify] Issue 124 in pygr: missing file (pygr/seqfmt.c: No such file or directory) from latest clone?
pygr at googlecode.com
pygr at googlecode.com
Wed Nov 4 13:50:04 PST 2009
Status: New
Owner: pygr-bug... at googlegroups.com
Labels: Type-Defect Priority-Medium
New issue 124 by rochak: missing file (pygr/seqfmt.c: No such file or
directory) from latest clone?
http://code.google.com/p/pygr/issues/detail?id=124
What steps will reproduce the problem?
1. get latest from git (I used: git clone
git://github.com/cjlee112/pygr.git)
2. cd pygr
3. sudo python setup.py install
What is the expected output? What do you see instead?
relevant output:
copying pygr/apps/splicegraph.py ->
build/lib.macosx-10.6-universal-2.6/pygr/apps
running build_ext
building 'pygr.seqfmt' extension
creating build/temp.macosx-10.6-universal-2.6
creating build/temp.macosx-10.6-universal-2.6/pygr
gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -fwrapv -Os
-Wall -Wstrict-prototypes -DENABLE_DTRACE -arch i386 -arch ppc -arch x86_64
-pipe
-I/System/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6
-c
pygr/seqfmt.c -o build/temp.macosx-10.6-universal-2.6/pygr/seqfmt.o
i686-apple-darwin10-gcc-4.2.1: pygr/seqfmt.c: No such file or directory
i686-apple-darwin10-gcc-4.2.1: no input files
powerpc-apple-darwin10-gcc-4.2.1: pygr/seqfmt.c: No such file or directory
powerpc-apple-darwin10-gcc-4.2.1: no input files
i686-apple-darwin10-gcc-4.2.1: pygr/seqfmt.c: No such file or directory
i686-apple-darwin10-gcc-4.2.1: no input files
lipo: can't figure out the architecture type of: /var/tmp//ccbA5x5D.out
error: command 'gcc-4.2' failed with exit status 1
What version of the product are you using? On what operating system?
Latest from git. Happens on Mac OSX 6.1, Linux
Please provide any additional information below.
Thats about it. Missing file.
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