[pygr-notify] Issue 34 in pygr: Refactor BLAST support as a mapping
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Wed Sep 10 21:25:11 PDT 2008
Issue 34: Refactor BLAST support as a mapping
http://code.google.com/p/pygr/issues/detail?id=34
New issue report by cjlee112:
Currently this is provided via two methods on BlastDB: blast() and
megablast().
In the spirit of generalizing this to follow the "Pygr pattern", this
should instead be a mapping, specifically a Pygr graph interface that takes
sequences as source nodes, returns homologous sequences as destination
nodes.
BlastDB can keep its blast() and megablast() methods, for purposes of
backwards compatibility.
Issue attributes:
Status: New
Owner: cjlee112
Labels: Type-Enhancement Priority-Low Milestone-Release0.8
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