[pygr-notify] Issue 45 in pygr: BlastDB has gotten slow due to cache

codesite-noreply at google.com codesite-noreply at google.com
Mon Oct 20 19:26:48 PDT 2008


Issue 45: BlastDB has gotten slow due to cache
http://code.google.com/p/pygr/issues/detail?id=45

Comment #2 by deepreds:
bsddb.btopen('R1.seqlen', 'r')

bsddb.btopen has the problem. Whenever I tried to open R1.seqlen, it  
preload all
indexes into memory.



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