[pygr-notify] Issue 35 in pygr: Update docs for 0.8 refactoring
codesite-noreply at google.com
codesite-noreply at google.com
Tue Oct 14 17:16:06 PDT 2008
Issue 35: Update docs for 0.8 refactoring
http://code.google.com/p/pygr/issues/detail?id=35
Comment #1 by robert.d.kirkpatrick:
The tutorial at
http://www.doe-mbi.ucla.edu/~leec/newpygrdocs/seq-align.html is
linked to from the Google Code site docs, but the tutorial is out of date.
See
section 1.1.2:
import pygr.Data # FINDS DATA WHEREVER IT'S REGISTERED
msa = pygr.Data.Bio.Seq.MSA.ucsc17() # SANTA CRUZ 17-GENOME ALIGNMENT
exons = pygr.Data.Leelab.ASAP2.hg17.exons() # ASAP2 HUMAN EXONS
pygr.Data.Bio.Seq.MSA.ucsc17 doesn't exist, neither does
pygr.Data.Leelab.ASAP2.hg17.exons.
The example in the latest git repo looks good though. Need to get this
non-GoogleCode link updated.
--
You received this message because you are listed in the owner
or CC fields of this issue, or because you starred this issue.
You may adjust your issue notification preferences at:
http://code.google.com/hosting/settings
More information about the pygr-notify
mailing list