[pygr-notify] [pygr commit] r57 - wiki

[codesite-noreply at google.com]

Author: jqian.ubc
Date: Tue Jun 24 11:35:38 2008
New Revision: 57

Modified:
   wiki/PygrOnEnsembl.wiki

Log:
Edited wiki page through web user interface.

Modified: wiki/PygrOnEnsembl.wiki
==============================================================================
--- wiki/PygrOnEnsembl.wiki	(original)
+++ wiki/PygrOnEnsembl.wiki	Tue Jun 24 11:35:38 2008
@@ -63,12 +63,12 @@
  *1.* obtain the DNA sequence of a particular genomic region (defined 
by chromosome, start, end and strand)

      feature method in adaptor.py:
-         - Driver: fetch_sequence_by_region(chromosome, start, end, strand)
+     - Driver: fetch_sequence_by_region(chromosome, start, end, strand)

 *2.* find all the exons, genes and transcripts in a genomic region

      feature methods in adaptor.py:
-         - ExonAdaptor: fetch_exons_by_seqregion(chromosome, start, 
end, strand, driver)
+     - ExonAdaptor: fetch_exons_by_seqregion(chromosome, start, end, 
strand, driver)

           - GeneAdaptor: fetch_genes_by_seqregion(chromosome, start, 
end, strand, driver)

@@ -76,7 +76,7 @@
            strand, driver)

      feature method in datamodel.py:
-         - Sliceable: getExons()
+     - Sliceable: getExons()

  *3.* obtain the DNA sequence of a particular sliceable object (such as 
a gene, a transcript or an exon)