[ngs] RNAseq Pipeline

[Diego Mazzotti]

Dear all,

Please find the pipeline created by our group (me, Allison, Lauren and
Rachel) to perform RNAseq analysis. The pipeline was built to map the reads
against the reference transcriptome, count the reads per transcript and
create a fasta file for the unmapped reads.

I would appreciate if you could perform a test run with the sample files
provided in the repository,

More instructions and tutorials in the README.md file (please read!)

https://github.com/mazzottidr/RNAseq_pipeline_NGS2013.git

Feel free to send some suggestions!

Thank you all!!!

Best,

Diego R. Mazzotti, Ph.D.
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