<div dir="ltr">Dear colleagues,<div><br></div><div>I am happy to announce version v0.7.1 of khmer. It is identical to v0.7 except that it properly installs. Thanks go to Dylan Bodington @TheIcemanBoreth for quick reporting of the problem with v0.7. </div>
<div><br></div><div>Here's the changelog:</div><div><br></div><div><div>* New script: sample-reads-randomly.py which does a single pass random</div><div>subsample using reservoir sampling.</div><div><br></div><div>* the version number is now only stored in one place</div>
<div><br></div><div>* Makefile: new dist, cppcheck, pep8, and autopep8 targets for developers.</div><div>VERSION is now set by versioneer and exported to C/C++ code.</div><div><br></div><div>* README switched from MarkDown to ReStructuredText format to clean up PyPI</div>
<div>listing. Install count badge added.</div><div><br></div><div>* doc/: updates to how the scripts are called. Sphinx now pulls version</div><div>number from versioneer. C/Python integration is now partially documented.</div>
<div>Reference to bleeding-edge has been removed. Release instructions have been</div><div>clarified and simplified.</div><div><br></div><div>* all python code in khmer/, scripts/, and tests/ should be PEP8 compliant now.</div>
<div><br></div><div>* khmer/_khmermodule.cc has gotten a once-over with cpychecker. Type errors</div><div>were eliminated and the error checking has improved.</div><div><br></div><div>* Several fixes motivated by the results of a Coverity C/C++ scan. </div>
<div><br></div><div>* Tests that require greater than 0.5 gigabytes of memory are now annotated as</div><div>being 'highmem' and can be skipped by changing two lines in setup.cfg</div><div><br></div><div>* warnings about -Wstrict-prototypes will no longer appear</div>
<div><br></div><div>* contributors to this release are: ctb, mr-c and cswelcher. </div><div><br></div><br clear="all"><div><br></div>-- <br><div dir="ltr"><font face="courier new, monospace">Michael R. Crusoe: Software Engineer and Bioinformatician <a href="mailto:mcrusoe@msu.edu" target="_blank">mcrusoe@msu.edu</a><br>
@ the Genomics, Evolution, and Development lab; Michigan State University<br><a href="http://ged.msu.edu/" target="_blank">http://ged.msu.edu/</a> <a href="http://orcid.org/0000-0002-2961-9670" target="_blank">http://orcid.org/0000-0002-2961-9670</a> <a href="http://twitter.com/biocrusoe" target="_blank">@biocrusoe</a></font><br>
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