[khmer] Filter-abund and filter-below-abund

Raf Winand raf.winand at esat.kuleuven.be
Wed Oct 28 04:13:57 PDT 2015


Hi

I'm currently exploring khmer but I have question about two scripts, i.e.
filter-abund.py and filter-below-abund.py. For filter-abund.py I found that
it trims the sequences at a certain k-mer abundance but I can't seem to
find a description of what filter-below-abund.py actually does. Could you
tell me what the difference is between these scripts?

Best regards
Raf


-- 
Raf Winand
PhD student
Faculty of Engineering - ESAT/STADIUS
Bioinformatics Group
Kasteelpark Arenberg 10 bus 2446
3001 Heverlee
BELGIUM
Tel: +32 16 32 86 43
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