[khmer] Suggestion on check_space test

C. Titus Brown ctb at msu.edu
Thu Sep 25 09:06:24 PDT 2014


On Thu, Sep 25, 2014 at 10:58:46AM -0500, Adina Chuang Howe wrote:
> Hi team,
> 
> I was running diginorm today on two different disks (one for the
> intermediate normalized files) and one on another disk (containing the raw
> sequences) .  I think this will be fairly typical in the future.
> Currently, a test (file.py check_space) will error out, given this setup.
> I think it'd be nice to be able to bypass this check or at least make it
> more robust (to checking the write-out disk only).
> 
> Low priority, but notable, hopefully helpful.

Agreed -- see

https://github.com/ged-lab/khmer/issues/399

--titus
-- 
C. Titus Brown, ctb at msu.edu



More information about the khmer mailing list