[khmer] normalize-by-median.py - IOError: [Errno 30] Read-only file system:

[Ramakrishnan Srinivasan]

Hello Efraim,

Thank you for using khmer. This looks like an error owing to incompatible
file system formats.

This might happen if we tried writing to an incompatible file system (say,
NTFS) from certain versions of Linux. Any information on the exact Linux
distro+version you're running and the filesystem format of the partition
you are writing to would help.

Could you maybe give us the output of the following commands:
`uname -a`
`mount`

Thank you!



--
Ram


On Wed, Jul 2, 2014 at 12:13 PM, Efraim Rodrigues <efraimnaassom at gmail.com>
wrote:

> Greetings,
>
> Before running normalize-by-median.py, I ran interleave-reads.py which
> generated a 'se' file. Then, it looks like the normalize-by-median.py
> requires special rights to work on this output file from
> interleave-reads.py and even though I have already set all possible rights,
> it is still returning the error  IOError: [Errno 30] Read-only file system:
>
> I looked it up on github issues and khmer.readthedocs.org/ but I could
> not find anything related to it. Thus, has anyone faced this problem before?
>
> Regards,
> Efraim Rodrigues.
>
> _______________________________________________
> khmer mailing list
> khmer at lists.idyll.org
> http://lists.idyll.org/listinfo/khmer
>
>
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