[khmer] zero abundance kmers

Aaron Liston listona at science.oregonstate.edu
Wed Jan 29 21:15:24 PST 2014


I am using load-into-counting.py and abundance-dist.py  to plot the  
kmer abundance distribution of read data at various stages in the  
digital normalization process.  Some of the plots have a small  
fraction (<0.001) of kmers with zero abundance.  Is this an error, or  
does it mean something?
Thanks, Aaron Liston






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