[khmer] calc-best-assembly.py

[Michael R. Crusoe]

[including the mailing list for posterity, mea culpa]

It is in the protocols-v0.8.3 branch of khmer:

https://github.com/ged-lab/khmer/blob/protocols-v0.8.3/sandbox/calc-best-assembly.py

Install instructions are at:
https://khmer-protocols.readthedocs.org/en/v0.8.3/metagenomics/1-quality.html#install-software



On Fri, Jan 3, 2014 at 4:07 PM, Yiseul Kim <kimyise2 at msu.edu> wrote:

> Hello,
>
> Could someone help me with finding the location of *calc-best-assembly.py*?
> The newly released metagenomic assembly protocol (
> https://khmer-protocols.readthedocs.org/en/v0.8.3/metagenomics/4-assemble.html)
> says it is located under /khmer/sandbox but I am not able to find it. Any
> help would be appreciated.
>
> Regards,
> Yiseul
>
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> khmer at lists.idyll.org
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>
>


-- 
Michael R. Crusoe: Software Engineer and Bioinformatician  mcrusoe at msu.edu
 @ the Genomics, Evolution, and Development lab; Michigan State University
http://ged.msu.edu/     http://orcid.org/0000-0002-2961-9670
@biocrusoe<http://twitter.com/biocrusoe>
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