[khmer] filter-below-abund.py fastq scores from previous file
C. Titus Brown
ctb at msu.edu
Fri Apr 19 09:24:19 PDT 2013
On Fri, Apr 19, 2013 at 12:14:48PM +0300, Jens-Konrad Preem wrote:
> On 04/17/2013 07:21 AM, C. Titus Brown wrote:
>> I have hacked this into ged-lab/master branch for filter-abund and
>> filter-below-abund. Let me know if it works (or doesn't work!)
>>
>> cheers,
>> --titus
>>
> So if I clone and build from the git page, those two scripts should now
> put out fastq as their output?
Yes.
> Or do they need some extra tags at the start time?.
Nope.
> As a note - the sandbox scripts do not have the #!/usr/bin/env python
> line and also need to be chmod +x in addition to this to be started.
> Don't know if it is so as some thought out design issue/feature or not,
> anyway thought I'd mention it.
Thanks for pointing this out!
--t
--
C. Titus Brown, ctb at msu.edu
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