[cartwheel-svn] Revision 228 [All]

[Commit messages for Cartwheel.]

Revision: 228
Author:   t
Date:     Sun, 27 May 2007 16:14:04 -0700

Log message:
switched over to using my own blastparser, instead of BioPython's.  removed
all 'import Bio' stuff.



Changed paths:
M    trunk/cartwheel-server/bin/canal-scgi-server
M    trunk/cartwheel-server/bin/canal.fcgi
M    trunk/cartwheel-server/bin/run-python
M    trunk/cartwheel-server/doc/INSTALL.html
M    trunk/cartwheel-server/doc/INSTALL.txt
A    trunk/cartwheel-server/lib/blastparser.py
M    trunk/cartwheel-server/lib/cartwheel/__init__.py
D    trunk/cartwheel-server/lib/formats/biopy_handlers.py
A    trunk/cartwheel-server/lib/formats/blast_handlers.py
M    trunk/cartwheel-server/lib/formats/handlers.py
M    trunk/cartwheel-server/tests/functional-tests/test-with-user/test-pair/__init__.py