[bip] Ensembl API

[Giovanni Marco Dall'Olio]

On Thu, Sep 18, 2008 at 4:07 PM, Peter Saffrey <pzs at dcs.gla.ac.uk> wrote:
> This post is as much to lend another voice to the crowd as anything else.
>
> However, as others have pointed out, there's not a great deal you can do
> if all the APIs you need to use are in Perl. Does anybody else work with
> Ensembl, retrieving and manipulating gene sequences? Are there any
> options for doing this in Python?

You can use Jython as well, using the Java APIs for ensembl.
I have never did it.

> Peter
>
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> biology-in-python mailing list - bip at lists.idyll.org.
>
> See http://bio.scipy.org/ for our Wiki.
>



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