> > def read(): > # My read code is using cnestedlist.NLMSA(path, 'r') > alignment = cnestedlist.NLMSA('/tmp/test') > # i then use # genome = alignment.seqDict.prefixDict[genome_name] # instead of > seq_db = seqdb.BlastDB('seq.fa') # for my queries (I looked at the keys in prefixDict to figure out what the right genome_name was.) Diane