[bip] Bioinformatics Programming Language Shootout, Python performance poopoo'd

Paulo Nuin nuin at genedrift.org
Tue Feb 5 17:38:52 PST 2008


Titus Brown wrote:
> On Tue, Feb 05, 2008 at 06:38:19PM -0500, Paulo Nuin wrote:
> -> I will comment on my blog and if permitted I would like to include 
> -> everyone's view about it.
>
> Well, the mailing list archives are open and searchable, so I'm sure
> you're welcome to do so ;)
>   
I will have something ready probably on Thursday. I will check the code 
tomorrow and re-read the paper.

> -> I have found some othe "strange" stuff too, but I can't say I am that 
> -> expert on Python to weigh that much.
>
> I suspect that the code could use some systematic code review; "we"
> (i.e. someone else :) could even write up something semi-formal if it
> turns out that the results are bogus.
>   
Depending on some code review it would be great to have something 
written about it.

Cheers

Paulo




More information about the biology-in-python mailing list