[Avida-SVN] r2307 - in development/tests/_exp_500u: . expected expected/data expected/data/archive
brysonda at myxo.css.msu.edu
brysonda at myxo.css.msu.edu
Thu Feb 7 07:21:27 PST 2008
Author: brysonda
Date: 2008-02-07 10:21:26 -0500 (Thu, 07 Feb 2008)
New Revision: 2307
Added:
development/tests/_exp_500u/expected/
development/tests/_exp_500u/expected/data/
development/tests/_exp_500u/expected/data/archive/
development/tests/_exp_500u/expected/data/archive/098-aaaai.org
development/tests/_exp_500u/expected/data/archive/099-aaabb.org
development/tests/_exp_500u/expected/data/archive/100-aaaaa.org
development/tests/_exp_500u/expected/data/archive/100-aaaab.org
development/tests/_exp_500u/expected/data/archive/100-aaaad.org
development/tests/_exp_500u/expected/data/archive/100-aaabz.org
development/tests/_exp_500u/expected/data/archive/100-aaadl.org
development/tests/_exp_500u/expected/data/archive/100-aaahv.org
development/tests/_exp_500u/expected/data/average.dat
development/tests/_exp_500u/expected/data/count.dat
development/tests/_exp_500u/expected/data/dominant.dat
development/tests/_exp_500u/expected/data/resource.dat
development/tests/_exp_500u/expected/data/stats.dat
development/tests/_exp_500u/expected/data/tasks.dat
development/tests/_exp_500u/expected/data/tasks_exe.dat
development/tests/_exp_500u/expected/data/tasks_quality.dat
development/tests/_exp_500u/expected/data/time.dat
Log:
Commit new expected results of _exp_500u with relaxed speculative execution constraints
Added: development/tests/_exp_500u/expected/data/archive/098-aaaai.org
===================================================================
--- development/tests/_exp_500u/expected/data/archive/098-aaaai.org (rev 0)
+++ development/tests/_exp_500u/expected/data/archive/098-aaaai.org 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,132 @@
+# Thu Feb 7 10:31:28 2008
+# Filename........: archive/098-aaaai.org
+# Update Output...: 450
+# Is Viable.......: 1
+# Repro Cycle Size: 0
+# Depth to Viable.: 0
+# Update Created..: 377
+# Genotype ID.....: 5930
+# Parent Gen ID...: 4775
+# Tree Depth......: 8
+# Parent Distance.: 1
+#
+# Generation: 0
+# Merit...........: 93.000000
+# Gestation Time..: 364
+# Fitness.........: 0.255495
+# Errors..........: 1
+# Genome Size.....: 98
+# Copied Size.....: 98
+# Executed Size...: 93
+# Offspring.......: SELF
+#
+# Tasks Performed:
+# not 0 (0.000000)
+# nand 0 (0.000000)
+# and 0 (0.000000)
+# orn 0 (0.000000)
+# or 0 (0.000000)
+# andn 0 (0.000000)
+# nor 0 (0.000000)
+# xor 0 (0.000000)
+# equ 0 (0.000000)
+
+
+h-alloc
+h-search
+nop-D
+nop-A
+mov-head
+nop-C
+add
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-copy
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+pop
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nand
+nop-C
+nop-C
+nop-C
+nop-C
+if-less
+nop-C
+nop-C
+h-divide
+nop-C
+h-alloc
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-D
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-search
+h-copy
+if-label
+nop-D
+nop-A
+h-divide
+mov-head
+nop-A
+add
+label
+nop-A
+nop-B
Added: development/tests/_exp_500u/expected/data/archive/099-aaabb.org
===================================================================
--- development/tests/_exp_500u/expected/data/archive/099-aaabb.org (rev 0)
+++ development/tests/_exp_500u/expected/data/archive/099-aaabb.org 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,133 @@
+# Thu Feb 7 10:31:21 2008
+# Filename........: archive/099-aaabb.org
+# Update Output...: 350
+# Is Viable.......: 1
+# Repro Cycle Size: 0
+# Depth to Viable.: 0
+# Update Created..: 299
+# Genotype ID.....: 2663
+# Parent Gen ID...: 1442
+# Tree Depth......: 9
+# Parent Distance.: 1
+#
+# Generation: 0
+# Merit...........: 94.000000
+# Gestation Time..: 373
+# Fitness.........: 0.252011
+# Errors..........: 1
+# Genome Size.....: 99
+# Copied Size.....: 99
+# Executed Size...: 94
+# Offspring.......: SELF
+#
+# Tasks Performed:
+# not 0 (0.000000)
+# nand 0 (0.000000)
+# and 0 (0.000000)
+# orn 0 (0.000000)
+# or 0 (0.000000)
+# andn 0 (0.000000)
+# nor 0 (0.000000)
+# xor 0 (0.000000)
+# equ 0 (0.000000)
+
+
+h-alloc
+h-search
+nop-D
+nop-A
+mov-head
+nop-C
+add
+nop-C
+nop-D
+swap
+nop-C
+get-head
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+swap-stk
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-alloc
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+swap
+if-n-equ
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+push
+h-search
+h-copy
+if-label
+nop-D
+nop-A
+h-divide
+mov-head
+nop-A
+add
+label
+nop-A
+nop-B
Added: development/tests/_exp_500u/expected/data/archive/100-aaaaa.org
===================================================================
--- development/tests/_exp_500u/expected/data/archive/100-aaaaa.org (rev 0)
+++ development/tests/_exp_500u/expected/data/archive/100-aaaaa.org 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,134 @@
+# Thu Feb 7 10:31:16 2008
+# Filename........: archive/100-aaaaa.org
+# Update Output...: 50
+# Is Viable.......: 1
+# Repro Cycle Size: 0
+# Depth to Viable.: 0
+# Update Created..: -1
+# Genotype ID.....: 1
+# Parent Gen ID...: -1
+# Tree Depth......: 0
+# Parent Distance.: -1
+#
+# Generation: 0
+# Merit...........: 96.000000
+# Gestation Time..: 383
+# Fitness.........: 0.250653
+# Errors..........: 0
+# Genome Size.....: 100
+# Copied Size.....: 100
+# Executed Size...: 96
+# Offspring.......: SELF
+#
+# Tasks Performed:
+# not 0 (0.000000)
+# nand 0 (0.000000)
+# and 0 (0.000000)
+# orn 0 (0.000000)
+# or 0 (0.000000)
+# andn 0 (0.000000)
+# nor 0 (0.000000)
+# xor 0 (0.000000)
+# equ 0 (0.000000)
+
+
+h-alloc
+h-search
+nop-D
+nop-A
+mov-head
+nop-C
+add
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-search
+h-copy
+if-label
+nop-D
+nop-A
+h-divide
+mov-head
+nop-A
+add
+label
+nop-A
+nop-B
Added: development/tests/_exp_500u/expected/data/archive/100-aaaab.org
===================================================================
--- development/tests/_exp_500u/expected/data/archive/100-aaaab.org (rev 0)
+++ development/tests/_exp_500u/expected/data/archive/100-aaaab.org 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,134 @@
+# Thu Feb 7 10:31:18 2008
+# Filename........: archive/100-aaaab.org
+# Update Output...: 250
+# Is Viable.......: 1
+# Repro Cycle Size: 0
+# Depth to Viable.: 0
+# Update Created..: 26
+# Genotype ID.....: 3
+# Parent Gen ID...: 1
+# Tree Depth......: 1
+# Parent Distance.: 1
+#
+# Generation: 0
+# Merit...........: 96.000000
+# Gestation Time..: 382
+# Fitness.........: 0.251309
+# Errors..........: 1
+# Genome Size.....: 100
+# Copied Size.....: 100
+# Executed Size...: 96
+# Offspring.......: SELF
+#
+# Tasks Performed:
+# not 0 (0.000000)
+# nand 0 (0.000000)
+# and 0 (0.000000)
+# orn 0 (0.000000)
+# or 0 (0.000000)
+# andn 0 (0.000000)
+# nor 0 (0.000000)
+# xor 0 (0.000000)
+# equ 0 (0.000000)
+
+
+h-alloc
+h-search
+nop-D
+nop-A
+mov-head
+nop-C
+add
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-alloc
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-search
+h-copy
+if-label
+nop-D
+nop-A
+h-divide
+mov-head
+nop-A
+add
+label
+nop-A
+nop-B
Added: development/tests/_exp_500u/expected/data/archive/100-aaaad.org
===================================================================
--- development/tests/_exp_500u/expected/data/archive/100-aaaad.org (rev 0)
+++ development/tests/_exp_500u/expected/data/archive/100-aaaad.org 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,134 @@
+# Thu Feb 7 10:31:16 2008
+# Filename........: archive/100-aaaad.org
+# Update Output...: 100
+# Is Viable.......: 1
+# Repro Cycle Size: 0
+# Depth to Viable.: 0
+# Update Created..: 51
+# Genotype ID.....: 7
+# Parent Gen ID...: 1
+# Tree Depth......: 1
+# Parent Distance.: 1
+#
+# Generation: 0
+# Merit...........: 96.000000
+# Gestation Time..: 383
+# Fitness.........: 0.250653
+# Errors..........: 0
+# Genome Size.....: 100
+# Copied Size.....: 100
+# Executed Size...: 96
+# Offspring.......: SELF
+#
+# Tasks Performed:
+# not 0 (0.000000)
+# nand 0 (0.000000)
+# and 0 (0.000000)
+# orn 0 (0.000000)
+# or 0 (0.000000)
+# andn 0 (0.000000)
+# nor 0 (0.000000)
+# xor 0 (0.000000)
+# equ 0 (0.000000)
+
+
+h-alloc
+h-search
+nop-D
+nop-A
+mov-head
+nop-C
+add
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-D
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-search
+h-copy
+if-label
+nop-D
+nop-A
+h-divide
+mov-head
+nop-A
+add
+label
+nop-A
+nop-B
Added: development/tests/_exp_500u/expected/data/archive/100-aaabz.org
===================================================================
--- development/tests/_exp_500u/expected/data/archive/100-aaabz.org (rev 0)
+++ development/tests/_exp_500u/expected/data/archive/100-aaabz.org 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,134 @@
+# Thu Feb 7 10:31:24 2008
+# Filename........: archive/100-aaabz.org
+# Update Output...: 400
+# Is Viable.......: 1
+# Repro Cycle Size: 0
+# Depth to Viable.: 0
+# Update Created..: 214
+# Genotype ID.....: 819
+# Parent Gen ID...: 522
+# Tree Depth......: 8
+# Parent Distance.: 1
+#
+# Generation: 0
+# Merit...........: 96.000000
+# Gestation Time..: 373
+# Fitness.........: 0.257373
+# Errors..........: 1
+# Genome Size.....: 100
+# Copied Size.....: 100
+# Executed Size...: 96
+# Offspring.......: SELF
+#
+# Tasks Performed:
+# not 0 (0.000000)
+# nand 0 (0.000000)
+# and 0 (0.000000)
+# orn 0 (0.000000)
+# or 0 (0.000000)
+# andn 0 (0.000000)
+# nor 0 (0.000000)
+# xor 0 (0.000000)
+# equ 0 (0.000000)
+
+
+h-alloc
+h-search
+nop-D
+nop-A
+mov-head
+nop-C
+add
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-D
+nop-C
+nop-C
+nop-C
+nop-C
+h-alloc
+nop-C
+shift-l
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+dec
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+if-less
+nop-D
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+IO
+nop-C
+nop-C
+inc
+nop-C
+nop-C
+nop-C
+nop-C
+h-copy
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-search
+h-copy
+if-label
+nop-D
+nop-A
+h-divide
+mov-head
+nop-A
+add
+label
+nop-A
+nop-B
Added: development/tests/_exp_500u/expected/data/archive/100-aaadl.org
===================================================================
--- development/tests/_exp_500u/expected/data/archive/100-aaadl.org (rev 0)
+++ development/tests/_exp_500u/expected/data/archive/100-aaadl.org 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,134 @@
+# Thu Feb 7 10:31:19 2008
+# Filename........: archive/100-aaadl.org
+# Update Output...: 300
+# Is Viable.......: 1
+# Repro Cycle Size: 0
+# Depth to Viable.: 0
+# Update Created..: 251
+# Genotype ID.....: 1442
+# Parent Gen ID...: 1202
+# Tree Depth......: 8
+# Parent Distance.: 1
+#
+# Generation: 0
+# Merit...........: 95.000000
+# Gestation Time..: 377
+# Fitness.........: 0.251989
+# Errors..........: 1
+# Genome Size.....: 100
+# Copied Size.....: 100
+# Executed Size...: 95
+# Offspring.......: SELF
+#
+# Tasks Performed:
+# not 0 (0.000000)
+# nand 0 (0.000000)
+# and 0 (0.000000)
+# orn 0 (0.000000)
+# or 0 (0.000000)
+# andn 0 (0.000000)
+# nor 0 (0.000000)
+# xor 0 (0.000000)
+# equ 0 (0.000000)
+
+
+h-alloc
+h-search
+nop-D
+nop-A
+mov-head
+nop-C
+add
+nop-C
+nop-D
+swap
+nop-C
+get-head
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+swap-stk
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-alloc
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+swap
+if-n-equ
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+push
+h-search
+h-copy
+if-label
+nop-D
+nop-A
+h-divide
+mov-head
+nop-A
+add
+label
+nop-A
+nop-B
Added: development/tests/_exp_500u/expected/data/archive/100-aaahv.org
===================================================================
--- development/tests/_exp_500u/expected/data/archive/100-aaahv.org (rev 0)
+++ development/tests/_exp_500u/expected/data/archive/100-aaahv.org 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,134 @@
+# Thu Feb 7 10:31:35 2008
+# Filename........: archive/100-aaahv.org
+# Update Output...: 500
+# Is Viable.......: 1
+# Repro Cycle Size: 0
+# Depth to Viable.: 0
+# Update Created..: 326
+# Genotype ID.....: 3608
+# Parent Gen ID...: 2015
+# Tree Depth......: 9
+# Parent Distance.: 1
+#
+# Generation: 0
+# Merit...........: 95.000000
+# Gestation Time..: 376
+# Fitness.........: 0.252660
+# Errors..........: 3
+# Genome Size.....: 100
+# Copied Size.....: 100
+# Executed Size...: 95
+# Offspring.......: SELF
+#
+# Tasks Performed:
+# not 0 (0.000000)
+# nand 0 (0.000000)
+# and 0 (0.000000)
+# orn 0 (0.000000)
+# or 0 (0.000000)
+# andn 0 (0.000000)
+# nor 0 (0.000000)
+# xor 0 (0.000000)
+# equ 0 (0.000000)
+
+
+h-alloc
+h-search
+nop-D
+nop-A
+mov-head
+nop-C
+add
+nop-C
+nop-D
+nop-C
+inc
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-divide
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+dec
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+swap-stk
+nop-C
+h-alloc
+nop-C
+nop-C
+nop-C
+nop-C
+h-alloc
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+swap
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+nop-C
+h-search
+h-copy
+if-label
+nop-D
+nop-A
+h-divide
+mov-head
+nop-A
+add
+h-alloc
+label
+nop-A
+nop-B
Added: development/tests/_exp_500u/expected/data/average.dat
===================================================================
--- development/tests/_exp_500u/expected/data/average.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/average.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,70 @@
+# Avida Average Data
+# Thu Feb 7 10:31:16 2008
+# 1: Update
+# 2: Merit
+# 3: Gestation Time
+# 4: Fitness
+# 5: Repro Rate?
+# 6: Size
+# 7: Copied Size
+# 8: Executed Size
+# 9: Abundance
+# 10: Proportion of organisms that gave birth in this update
+# 11: Proportion of Breed True Organisms
+# 12: Genotype Depth
+# 13: Generation
+# 14: Neutral Metric
+# 15: Lineage Label
+# 16: True Replication Rate (based on births/update, time-averaged)
+
+0 96.000000 383.000000 0.000000 0.000000 100.000000 100.000000 96.000000 1.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000
+10 96 383 0 0 100 100 96 1 0 0 0 0 0 0 0
+20 96 383 0.250653 0 100 100 96 2 0 0 0 1 0.762496 0 0
+30 96 383 0.250653 0 100 100 96 1.33333 0 0 0.5 2 0.865887 0 0
+40 96 382.714 0.25084 0 100 100 96 1.4 0 0 0.714286 2.85714 0.79721 0 0
+50 96 382.75 0.250817 0 100 100 96 1.6 0.125 0.125 0.625 3.125 0.489238 0 0
+60 95.8462 381.923 0.250957 0 100 100 95.8462 1.625 0 0 0.923077 3.84615 1.18292 0 0
+70 95.8182 381.864 0.250923 0 100 100 95.8182 1.69231 0 0 1.18182 4.86364 0.852022 0 0
+80 93.3333 378.769 0.245737 0 100 98.7179 93.3333 1.625 0.025641 0 1.53846 5.87179 0.900394 0 0
+90 93.8 379 0.246966 0 99.94 99 93.8 1.5625 0.08 0.04 1.64 6.46 0.635003 0 0
+100 92.3051 375.339 0.245034 0 100 98.2712 92.3051 1.63889 0.101695 0.0508475 1.84746 7.08475 0.578541 0 0
+110 92.359 377.603 0.24404 0 100.026 98.0897 92.359 1.56 0 0 2.14103 7.83333 0.551367 0 0
+120 92.2981 377.192 0.244155 0 100.125 98.1058 92.2981 1.46479 0.0192308 0 2.45192 8.75962 0.462786 0 0
+130 92.3015 376.721 0.244546 0 100.243 98.6103 92.3015 1.52809 0.0588235 0.0220588 2.83088 9.72794 0.517336 0 0
+140 92.5 376.36 0.245424 0 100.274 99.5122 92.5 1.47748 0.0853659 0.0365854 3.03049 10.5427 0.643806 0 0
+150 92.0108 376.183 0.244229 0 100.263 99.3441 92.0108 1.5 0.0752688 0.0268817 3.19355 11.129 0.509422 0 0
+160 91.9909 375.355 0.2447 0 100.786 99.7455 91.9909 1.44737 0.0227273 0.00454545 3.48636 11.9136 0.294969 0 0
+170 91.8075 375.283 0.244364 0 100.706 99.6415 91.8075 1.49718 0 0 3.73585 12.8075 0.40212 0 0
+180 91.8317 374.764 0.244777 0 100.667 99.8867 91.8317 1.45755 0.0614887 0.0226537 4.00324 13.7314 0.113182 0 0
+190 91.6176 374.578 0.244196 0 100.751 99.7252 91.6176 1.40079 0.0566572 0.0283286 4.21246 14.4986 0.0802572 0 0
+200 91.5266 374.314 0.244036 0 100.851 99.7392 91.5367 1.33446 0.0810127 0.0227848 4.5443 15.2253 0.187869 0 0
+210 91.5327 374.472 0.244031 0 100.81 99.7991 91.5418 1.36308 0.0564334 0.0248307 4.76524 15.8916 -0.0650886 0 0
+220 91.549 374.118 0.244289 0 100.824 99.9857 91.5531 1.38418 0.0122449 0.00408163 4.99184 16.7408 -0.180302 0 0
+230 92.2405 375.277 0.245527 0 100.848 100.203 92.2586 1.38945 0.0361664 0.0180832 5.28752 17.7269 0.0537125 0 0
+240 92.2768 375.6 0.245407 0 101.115 100.338 92.3104 1.3587 0.0512 0.0176 5.672 18.5808 -0.057746 0 0
+250 91.877 373.861 0.24515 0 101.161 100.016 91.9151 1.34449 0.0658858 0.0278184 5.91508 19.3763 0.0200103 0 0
+260 91.6822 373.207 0.245073 0 101.182 99.98 91.7543 1.32332 0.0761015 0.0267023 6.18692 20.1402 -0.0779518 0 0
+270 92.143 374.687 0.245495 0 101.317 100.164 92.217 1.33169 0.053021 0.0209618 6.45993 20.8853 0.0988284 0 0
+280 92.1009 374.513 0.245391 0 101.419 100.213 92.1475 1.34027 0.0199557 0.00443459 6.68958 21.7228 0.135205 0 0
+290 92.4364 375.471 0.245944 0 101.709 100.41 92.6439 1.31769 0.0457782 0.0122075 7.04985 22.6144 0.0381499 0 0
+300 92.4181 374.815 0.246292 0 101.792 100.382 92.6036 1.30949 0.0451977 0.0131827 7.3258 23.4463 0.0724289 0 0
+310 92.4166 375.647 0.245806 0 102.321 100.714 92.7266 1.30559 0.0637555 0.0235808 7.59651 24.3004 0.066426 0 0
+320 92.4404 375.74 0.245607 0 102.524 100.883 92.634 1.28978 0.0531046 0.0155229 7.94281 25.0417 0.0662575 0 0
+330 92.6959 375.498 0.246439 0 102.239 100.893 92.8125 1.31331 0.0495427 0.0205793 8.1814 25.872 0.0461939 0 0
+340 92.8512 376.124 0.246614 0 102.346 101.079 92.9552 1.33049 0.0412811 0.0156584 8.48114 26.6598 0.130614 0 0
+350 93.4025 376.803 0.247606 0 102.583 101.579 93.3478 1.29585 0.0460614 0.0140187 8.83378 27.5167 0.203937 0 0
+360 94.0356 379.407 0.247972 0 103.099 102.125 94.0976 1.31497 0.040025 0.0187617 9.17073 28.3171 0.172941 0 0
+370 94.1869 380.172 0.247979 0 103.506 102.327 94.2669 1.30687 0.0478972 0.015771 9.52161 29.146 0.178305 0 0
+380 94.7596 379.968 0.24951 0 103.469 102.417 94.3306 1.32417 0.0551913 0.0240437 9.81421 29.9721 0.279408 0 0
+390 94.4794 380.688 0.248779 0 103.641 102.465 94.0566 1.31929 0.0556128 0.0200824 10.1648 30.758 0.264313 0 0
+400 94.4243 379.433 0.249638 0 103.648 102.137 93.7306 1.2956 0.0456311 0.0169903 10.466 31.55 0.183561 0 0
+410 95.0956 379.672 0.250828 0 103.86 102.384 94.226 1.30042 0.0475755 0.0196706 10.8198 32.3797 0.193349 0 0
+420 96.0349 379.675 0.253156 0 104.13 102.537 94.478 1.31034 0.0474547 0.0176877 11.1924 33.2826 0.202465 0 0
+430 96.8279 380.698 0.25463 0 104.495 103.01 94.6848 1.34101 0.0629599 0.0294358 11.433 34.1034 0.154897 0 0
+440 97.1723 380.546 0.255624 0 104.452 103.024 94.5846 1.32253 0.0536756 0.0229483 11.7464 34.9059 0.0654135 0 0
+450 98.0834 382.481 0.256981 0 104.653 103.518 95.1631 1.32401 0.0493141 0.0222469 12.0942 35.7393 -0.0256082 0 0
+460 98.32 382.151 0.258002 0 104.566 103.378 94.9544 1.32335 0.0438472 0.0152051 12.4021 36.6181 -0.0396148 0 0
+470 99.6427 382.481 0.261299 0 104.888 103.596 95.0882 1.30941 0.0601604 0.0230615 12.7834 37.5324 -0.0800501 0 0
+480 100.329 383.06 0.262758 0 105.261 103.758 95.1312 1.30882 0.0421456 0.0150064 13.0865 38.3892 -0.0825673 0 0
+490 100.773 382.719 0.264695 0 105.181 103.422 94.8925 1.29968 0.0552656 0.0242554 13.3967 39.3132 -0.0836264 0 0
+500 100.781 381.873 0.264857 0 105.137 103.382 94.6939 1.28226 0.0416292 0.0146751 13.6706 40.1671 -0.216168 0 0.155721
Added: development/tests/_exp_500u/expected/data/count.dat
===================================================================
--- development/tests/_exp_500u/expected/data/count.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/count.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,70 @@
+# Avida count data
+# Thu Feb 7 10:31:16 2008
+# 1: update
+# 2: number of insts executed this update
+# 3: number of organisms
+# 4: number of different genotypes
+# 5: number of different threshold genotypes
+# 6: number of different species
+# 7: number of different threshold species
+# 8: number of different lineages
+# 9: number of births in this update
+# 10: number of deaths in this update
+# 11: number of breed true
+# 12: number of breed true organisms?
+# 13: number of no-birth organisms
+# 14: number of single-threaded organisms
+# 15: number of multi-threaded organisms
+# 16: number of modified organisms
+
+0 30 1 1 1 0 0 0 1 0 1 1 1 1 0 0
+10 30 1 1 1 0 0 0 0 0 0 1 1 1 0 0
+20 60 2 1 1 0 0 0 0 0 0 2 1 2 0 0
+30 120 4 3 1 0 0 0 0 0 0 2 2 4 0 0
+40 210 7 5 1 0 0 0 0 0 0 3 4 7 0 0
+50 210 8 5 1 0 0 0 1 0 1 4 5 8 0 0
+60 390 13 8 1 0 0 0 0 0 0 6 7 13 0 0
+70 660 22 13 3 0 0 0 0 0 0 10 12 22 0 0
+80 1140 39 24 4 0 0 0 1 0 0 16 21 39 0 0
+90 1440 50 32 5 0 0 0 4 2 2 19 28 50 0 0
+100 1650 59 36 6 0 0 0 6 2 3 26 35 59 0 0
+110 2340 78 50 7 0 0 0 0 0 0 33 44 78 0 0
+120 3090 104 71 9 0 0 0 2 1 0 42 58 104 0 0
+130 3990 136 89 11 0 0 0 8 5 3 58 76 136 0 0
+140 4740 164 111 16 0 0 0 14 8 6 67 89 164 0 0
+150 5400 186 124 17 0 0 0 14 8 5 83 102 186 0 0
+160 6510 220 152 20 0 0 0 5 2 1 95 124 220 0 0
+170 7950 265 177 26 0 0 0 0 0 0 114 148 265 0 0
+180 9180 309 212 37 0 0 0 19 16 7 131 175 309 0 0
+190 10410 353 252 41 0 0 0 20 14 10 143 198 353 0 0
+200 11610 395 296 49 0 0 0 32 24 9 147 227 395 0 0
+210 13140 443 325 56 0 0 0 25 20 11 171 248 443 0 0
+220 14580 490 354 61 0 0 0 6 2 2 200 274 490 0 0
+230 16410 553 398 71 0 0 0 20 14 10 235 308 553 0 0
+240 18390 625 460 89 0 0 0 32 20 11 242 351 625 0 0
+250 20190 683 508 99 0 0 0 45 35 19 260 378 683 0 0
+260 22230 749 566 121 0 0 0 57 49 20 294 419 749 0 0
+270 24180 811 609 135 0 0 0 43 38 17 319 462 811 0 0
+280 27060 902 673 148 0 0 0 18 18 4 351 497 902 0 0
+290 29220 983 746 172 0 0 0 45 36 12 384 560 983 0 0
+300 31560 1062 811 190 0 0 0 48 38 14 416 599 1062 0 0
+310 34020 1145 877 211 0 0 0 73 62 27 458 642 1145 0 0
+320 36570 1224 949 224 0 0 0 65 60 19 470 700 1224 0 0
+330 39210 1312 999 247 0 0 0 65 60 27 502 742 1312 0 0
+340 41910 1405 1056 269 0 0 0 58 50 22 559 790 1405 0 0
+350 44640 1498 1156 289 0 0 0 69 59 21 579 829 1498 0 0
+360 47790 1599 1216 312 0 0 0 64 58 30 635 889 1599 0 0
+370 51180 1712 1310 344 0 0 0 82 76 27 689 977 1712 0 0
+380 54450 1830 1382 380 0 0 0 101 86 44 736 1029 1830 0 0
+390 57840 1942 1472 397 0 0 0 108 94 39 771 1063 1942 0 0
+400 61500 2060 1590 436 0 0 0 94 84 35 781 1162 2060 0 0
+410 65130 2186 1681 463 0 0 0 104 89 43 828 1219 2186 0 0
+420 69120 2318 1769 509 0 0 0 110 96 41 898 1283 2318 0 0
+430 72930 2446 1824 545 0 0 0 154 139 72 983 1340 2446 0 0
+440 76560 2571 1944 594 0 0 0 138 119 59 1013 1435 2571 0 0
+450 80580 2697 2037 641 0 0 0 133 122 60 1068 1500 2697 0 0
+460 84600 2828 2137 677 0 0 0 124 116 43 1121 1592 2828 0 0
+470 89100 2992 2285 723 0 0 0 180 158 69 1165 1714 2992 0 0
+480 93870 3132 2393 778 0 0 0 132 129 47 1229 1773 3132 0 0
+490 97290 3257 2506 826 0 0 0 180 166 79 1258 1827 3257 0 0
+500 99990 3339 2604 847 0 0 0 139 133 49 1257 1896 3339 0 0
Added: development/tests/_exp_500u/expected/data/dominant.dat
===================================================================
--- development/tests/_exp_500u/expected/data/dominant.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/dominant.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,70 @@
+# Avida Dominant Data
+# Thu Feb 7 10:31:16 2008
+# 1: Update
+# 2: Average Merit of the Dominant Genotype
+# 3: Average Gestation Time of the Dominant Genotype
+# 4: Average Fitness of the Dominant Genotype
+# 5: Repro Rate?
+# 6: Size of Dominant Genotype
+# 7: Copied Size of Dominant Genotype
+# 8: Executed Size of Dominant Genotype
+# 9: Abundance of Dominant Genotype
+# 10: Number of Births
+# 11: Number of Dominant Breed True?
+# 12: Dominant Gene Depth
+# 13: Dominant Breed In
+# 14: Max Fitness?
+# 15: Genotype ID of Dominant Genotype
+# 16: Name of the Dominant Genotype
+
+0 0.000000 0.000000 0.000000 0.000000 100 0.000000 0.000000 1 0 0 0 0 0.000000 1 100-aaaaa
+10 0 0 0 0 100 0 0 1 0 0 0 0 0 1 100-aaaaa
+20 96 383 0.250653 0.00261097 100 100 96 2 0 0 0 0 0.250653 1 100-aaaaa
+30 96 383 0.250653 0.00261097 100 100 96 2 0 0 0 0 0.250653 1 100-aaaaa
+40 96 383 0.250653 0.00261097 100 100 96 3 0 0 0 0 0.251309 1 100-aaaaa
+50 96 383 0.250653 0.00261097 100 100 96 4 1 1 0 0 0.251309 1 100-aaaaa
+60 96 383 0.250653 0.00261097 100 100 96 4 0 0 0 0 0.251969 1 100-aaaaa
+70 96 383 0.250653 0.00261097 100 100 96 5 0 0 0 0 0.251969 1 100-aaaaa
+80 96 383 0.250653 0.00261097 100 100 96 7 0 0 0 0 0.252632 1 100-aaaaa
+90 95 379 0.25066 0.00263852 100 100 95 4 0 0 2 0 0.253333 5 100-aaaac
+100 96 383 0.250653 0.00261097 100 100 96 5 0 0 1 0 0.253333 7 100-aaaad
+110 96 382 0.251309 0.0026178 100 100 96 5 0 0 1 0 0.253333 3 100-aaaab
+120 96 382 0.251309 0.0026178 100 100 96 8 0 0 1 0 0.253968 3 100-aaaab
+130 96 382 0.251309 0.0026178 100 100 96 10 0 0 1 0 0.255376 3 100-aaaab
+140 96 382 0.251309 0.0026178 100 100 96 11 2 0 1 0 0.256065 3 100-aaaab
+150 96 382 0.251309 0.0026178 100 100 96 12 4 3 1 0 0.256065 3 100-aaaab
+160 96 382 0.251309 0.0026178 100 100 96 10 0 0 1 0 0.257373 3 100-aaaab
+170 96 382 0.251309 0.0026178 100 100 96 9 0 0 1 0 0.257373 3 100-aaaab
+180 96 382 0.251309 0.0026178 100 100 96 13 0 0 1 0 0.257373 3 100-aaaab
+190 96 382 0.251309 0.0026178 100 100 96 18 1 1 1 0 0.26087 3 100-aaaab
+200 96 382 0.251309 0.0026178 100 100 96 17 5 2 1 0 0.26087 3 100-aaaab
+210 96 382 0.251309 0.0026178 100 100 96 13 2 1 1 0 0.26087 3 100-aaaab
+220 96 382 0.251309 0.0026178 100 100 96 10 0 0 1 0 0.26087 3 100-aaaab
+230 96 382 0.251309 0.0026178 100 100 96 11 0 0 1 0 0.260989 3 100-aaaab
+240 96 382 0.251309 0.0026178 100 100 96 7 0 0 1 0 0.262431 3 100-aaaab
+250 96 382 0.251309 0.0026178 100 100 96 6 1 0 1 0 0.262431 3 100-aaaab
+260 76 354 0.214689 0.00282486 100 100 76 7 0 0 6 0 0.262431 358 100-aaabg
+270 96 373 0.257373 0.00268097 100 100 96 7 0 0 8 0 0.262431 819 100-aaabz
+280 96 373 0.257373 0.00268097 100 100 96 9 0 0 8 0 0.262431 819 100-aaabz
+290 96 373 0.257373 0.00268097 100 100 96 8 0 0 8 0 0.262431 819 100-aaabz
+300 95 377 0.251989 0.00265252 100 100 95 8 0 0 8 0 0.263158 1442 100-aaadl
+310 95 377 0.251989 0.00265252 100 100 95 9 0 0 8 0 0.263158 1442 100-aaadl
+320 95 377 0.251989 0.00265252 100 100 95 7 0 0 8 0 0.264624 1442 100-aaadl
+330 96 378 0.253968 0.0026455 101 101 96 8 0 0 9 0 0.264624 2083 101-aaabt
+340 96 378 0.253968 0.0026455 101 101 96 6 1 0 9 0 0.264624 2083 101-aaabt
+350 94 373 0.252011 0.00268097 99 99.25 94 7 0 0 9 0 0.501333 2663 099-aaabb
+360 96 373 0.257373 0.00268097 100 100 96 8 0 0 8 0 0.501333 819 100-aaabz
+370 96 373 0.257373 0.00268097 100 100 96 9 3 1 8 0 0.501333 819 100-aaabz
+380 96 373 0.257373 0.00268097 100 100 96 11 0 0 8 0 0.520107 819 100-aaabz
+390 96 373 0.257373 0.00268097 100 100 96 11 0 0 8 0 0.520107 819 100-aaabz
+400 96 373 0.257373 0.00268097 100 100 96 9 0 0 8 0 0.520325 819 100-aaabz
+410 94 373 0.252011 0.00268097 99 99.0698 94 8 3 1 9 0 0.522911 2663 099-aaabb
+420 94 371 0.253369 0.00269542 100 100 94 9 3 3 10 0 0.52459 4400 100-aaahg
+430 94 371 0.253369 0.00269542 100 100 94 9 0 0 10 0 0.525745 4400 100-aaahg
+440 93 364 0.255495 0.00274725 98 98 93 9 1 1 8 0 0.527174 5930 098-aaaai
+450 93 364 0.255495 0.00274725 98 98 93 10 1 0 8 0 0.526316 5930 098-aaaai
+460 95 376 0.25266 0.00265957 100 100 95 12 0 0 9 0 0.526316 3608 100-aaahv
+470 188 372 0.505376 0.00268817 103 103 94 9 7 3 18 0 0.527473 9880 103-aaabi
+480 95 376 0.25266 0.00265957 100 100 95 10 1 1 9 0 0.531507 3608 100-aaahv
+490 95 376 0.25266 0.00265957 100 100 95 10 0 0 9 0 0.533333 3608 100-aaahv
+500 95 376 0.25266 0.00265957 100 100 95 13 0 0 9 0 0.533333 3608 100-aaahv
Added: development/tests/_exp_500u/expected/data/resource.dat
===================================================================
--- development/tests/_exp_500u/expected/data/resource.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/resource.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,57 @@
+# Avida resource data
+# Thu Feb 7 10:31:16 2008
+# First column gives the current update, all further columns give the quantity
+# of the particular resource at that update.
+# 1: Update
+
+0
+10
+20
+30
+40
+50
+60
+70
+80
+90
+100
+110
+120
+130
+140
+150
+160
+170
+180
+190
+200
+210
+220
+230
+240
+250
+260
+270
+280
+290
+300
+310
+320
+330
+340
+350
+360
+370
+380
+390
+400
+410
+420
+430
+440
+450
+460
+470
+480
+490
+500
Added: development/tests/_exp_500u/expected/data/stats.dat
===================================================================
--- development/tests/_exp_500u/expected/data/stats.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/stats.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,66 @@
+# Generic Statistics Data
+# Thu Feb 7 10:31:16 2008
+# 1: update
+# 2: average inferiority (energy)
+# 3: ave probability of any mutations in genome
+# 4: probability of any mutations in dom genome
+# 5: log(average fidelity)
+# 6: log(dominant fidelity)
+# 7: change in number of genotypes
+# 8: genotypic entropy
+# 9: species entropy
+# 10: depth of most reacent coalescence
+# 11: Total number of resamplings this generation
+# 12: Total number of organisms that failed to resample this generation
+
+0 0.000000 0.562828 0.562828 0.827429 0.827429 1 0.000000 0.000000 0 0 0
+10 0 0.562828 0.562828 0.827429 0.827429 0 0 0 0 0 0
+20 0 0.562828 0.562828 0.827429 0.827429 0 0 0 0 0 0
+30 0 0.562828 0.562828 0.827429 0.827429 0 1.03972 0 0 0 0
+40 -0.000747664 0.562828 0.562828 0.827429 0.827429 0 1.47508 0 0 0 0
+50 -0.000654236 0.562828 0.562828 0.827429 0.827429 0 1.38629 0 0 0 0
+60 -0.00121382 0.562828 0.562828 0.827429 0.827429 0 1.92512 0 0 0 0
+70 -0.00107659 0.562828 0.562828 0.827429 0.827429 0 2.36263 0 0 0 0
+80 0.0198055 0.562828 0.562828 0.827429 0.827429 1 2.932 0 0 0 0
+90 0.0148454 0.562638 0.562828 0.826995 0.827429 2 3.29159 0 0 0 0
+100 0.0226702 0.562828 0.562828 0.827429 0.827429 2 3.37753 0 1 0 0
+110 0.0293492 0.56291 0.562828 0.827615 0.827429 0 3.73924 0 1 0 0
+120 0.0288794 0.563224 0.562828 0.828336 0.827429 1 4.04363 0 1 0 0
+130 0.0272792 0.563597 0.562828 0.829188 0.827429 2 4.28394 0 1 0 0
+140 0.0236973 0.563697 0.562828 0.829418 0.827429 5 4.52786 0 1 0 0
+150 0.0285757 0.563662 0.562828 0.829339 0.827429 5 4.60099 0 1 0 0
+160 0.0266482 0.565313 0.562828 0.833129 0.827429 2 4.81593 0 1 0 0
+170 0.0280247 0.565059 0.562828 0.832544 0.827429 0 4.97239 0 1 0 0
+180 0.0263345 0.564936 0.562828 0.832262 0.827429 2 5.16424 0 1 0 0
+190 0.0287104 0.565201 0.562828 0.832871 0.827429 1 5.31925 0 1 0 0
+200 0.0293658 0.565516 0.562828 0.833595 0.827429 8 5.51299 0 1 0 0
+210 0.0293881 0.565389 0.562828 0.833303 0.827429 0 5.63034 0 1 0 0
+220 0.0283329 0.565433 0.562828 0.833406 0.827429 3 5.71382 0 1 0 0
+230 0.0232764 0.565508 0.562828 0.833577 0.827429 2 5.83825 0 1 0 0
+240 0.0237656 0.566348 0.562828 0.835513 0.827429 11 6.00621 0 1 0 0
+250 0.0248109 0.566492 0.562828 0.835845 0.827429 7 6.11346 0 1 0 0
+260 -0.132363 0.566557 0.562828 0.835994 0.827429 11 6.22671 0 1 0 0
+270 0.0472492 0.566982 0.562828 0.836975 0.827429 8 6.29294 0 1 0 0
+280 0.0476734 0.567302 0.562828 0.837715 0.827429 4 6.38676 0 1 0 0
+290 0.0454202 0.568211 0.562828 0.839817 0.827429 13 6.49447 0 1 0 0
+300 0.0228676 0.56847 0.562828 0.840418 0.827429 13 6.58306 0 1 0 0
+310 0.0248424 0.57012 0.562828 0.84425 0.827429 10 6.66077 0 2 0 0
+320 0.0256536 0.570753 0.562828 0.845722 0.827429 7 6.73783 0 2 0 0
+330 0.0300955 0.569865 0.565986 0.843656 0.834678 0 6.79185 0 2 0 0
+340 0.0293856 0.570199 0.565986 0.844434 0.834678 8 6.84806 0 2 0 0
+350 0.0176325 0.570937 0.559648 0.846151 0.820181 13 6.94811 0 2 0 0
+360 0.0372087 0.57254 0.562828 0.849896 0.827429 3 6.99539 0 2 0 0
+370 0.0371796 0.573798 0.562828 0.852841 0.827429 14 7.06587 0 2 0 0
+380 0.031028 0.573685 0.562828 0.852577 0.827429 8 7.10984 0 2 0 0
+390 0.0339598 0.574214 0.562828 0.853818 0.827429 18 7.17783 0 2 0 0
+400 0.0305145 0.574235 0.562828 0.853869 0.827429 16 7.26076 0 2 0 0
+410 0.00470421 0.574892 0.559648 0.855412 0.820181 11 7.31977 0 2 0 0
+420 0.000840744 0.575722 0.562828 0.857368 0.827429 20 7.36363 0 2 0 0
+430 -0.0049616 0.576843 0.562828 0.860012 0.827429 -2 7.37975 0 2 0 0
+440 -0.000507217 0.576709 0.556445 0.859696 0.812933 5 7.45637 0 2 0 0
+450 -0.00579964 0.577326 0.556445 0.861153 0.812933 2 7.49535 0 2 0 0
+460 -0.0209236 0.577062 0.562828 0.860529 0.827429 11 7.55005 0 2 0 0
+470 0.659639 0.578045 0.572232 0.862858 0.849175 28 7.62233 0 2 0 0
+480 -0.0391916 0.579185 0.562828 0.865562 0.827429 -5 7.66832 0 2 0 0
+490 -0.0465334 0.578941 0.562828 0.864982 0.827429 7 7.71952 0 2 0 0
+500 -0.0471482 0.578806 0.562828 0.864662 0.827429 6 7.76047 0 2 0 0
Added: development/tests/_exp_500u/expected/data/tasks.dat
===================================================================
--- development/tests/_exp_500u/expected/data/tasks.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/tasks.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,66 @@
+# Avida tasks data
+# Thu Feb 7 10:31:16 2008
+# First column gives the current update, next columns give the number
+# of organisms that have the particular task as a component of their merit
+# 1: Update
+# 2: Not
+# 3: Nand
+# 4: And
+# 5: OrNot
+# 6: Or
+# 7: AndNot
+# 8: Nor
+# 9: Xor
+# 10: Equals
+
+0 0 0 0 0 0 0 0 0 0
+10 0 0 0 0 0 0 0 0 0
+20 0 0 0 0 0 0 0 0 0
+30 0 0 0 0 0 0 0 0 0
+40 0 0 0 0 0 0 0 0 0
+50 0 0 0 0 0 0 0 0 0
+60 0 0 0 0 0 0 0 0 0
+70 0 0 0 0 0 0 0 0 0
+80 0 0 0 0 0 0 0 0 0
+90 0 0 0 0 0 0 0 0 0
+100 0 0 0 0 0 0 0 0 0
+110 0 0 0 0 0 0 0 0 0
+120 0 0 0 0 0 0 0 0 0
+130 0 0 0 0 0 0 0 0 0
+140 0 0 0 0 0 0 0 0 0
+150 0 0 0 0 0 0 0 0 0
+160 0 0 0 0 0 0 0 0 0
+170 0 0 0 0 0 0 0 0 0
+180 0 0 0 0 0 0 0 0 0
+190 0 0 0 0 0 0 0 0 0
+200 0 0 0 0 0 0 0 0 0
+210 0 0 0 0 0 0 0 0 0
+220 0 0 0 0 0 0 0 0 0
+230 0 0 0 0 0 0 0 0 0
+240 0 0 0 0 0 0 0 0 0
+250 0 0 0 0 0 0 0 0 0
+260 0 0 0 0 0 0 0 0 0
+270 0 0 0 0 0 0 0 0 0
+280 0 0 0 0 0 0 0 0 0
+290 0 0 0 0 0 0 0 0 0
+300 0 0 0 0 0 0 0 0 0
+310 0 0 0 0 0 0 0 0 0
+320 0 0 0 0 0 0 0 0 0
+330 0 0 0 0 0 0 0 0 0
+340 0 0 0 0 0 0 0 0 0
+350 2 0 0 0 0 0 0 0 0
+360 3 0 0 0 0 0 0 0 0
+370 5 0 0 0 0 0 0 0 0
+380 13 0 0 0 0 0 0 0 0
+390 13 0 0 0 0 0 0 0 0
+400 23 0 0 0 0 0 0 0 0
+410 27 0 0 0 0 0 0 0 0
+420 46 0 0 0 0 0 0 0 0
+430 62 0 0 0 0 0 0 0 0
+440 76 0 0 0 0 0 0 0 0
+450 91 0 0 0 0 0 0 0 0
+460 109 0 0 0 0 0 0 0 0
+470 149 0 0 0 0 0 0 0 0
+480 179 0 0 0 0 0 0 0 0
+490 213 0 0 0 0 0 0 0 0
+500 223 0 0 0 0 0 0 0 0
Added: development/tests/_exp_500u/expected/data/tasks_exe.dat
===================================================================
--- development/tests/_exp_500u/expected/data/tasks_exe.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/tasks_exe.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,66 @@
+# Avida tasks execution data
+# Thu Feb 7 10:31:16 2008
+# First column gives the current update, all further columns give the number
+# of times the particular task has been executed this update.
+# 1: Update
+# 2: Not
+# 3: Nand
+# 4: And
+# 5: OrNot
+# 6: Or
+# 7: AndNot
+# 8: Nor
+# 9: Xor
+# 10: Equals
+
+0 0 0 0 0 0 0 0 0 0
+10 0 0 0 0 0 0 0 0 0
+20 0 0 0 0 0 0 0 0 0
+30 0 0 0 0 0 0 0 0 0
+40 0 0 0 0 0 0 0 0 0
+50 0 0 0 0 0 0 0 0 0
+60 0 0 0 0 0 0 0 0 0
+70 0 0 0 0 0 0 0 0 0
+80 0 0 0 0 0 0 0 0 0
+90 0 0 0 0 0 0 0 0 0
+100 0 0 0 0 0 0 0 0 0
+110 0 0 0 0 0 0 0 0 0
+120 0 0 0 0 0 0 0 0 0
+130 0 0 0 0 0 0 0 0 0
+140 0 0 0 0 0 0 0 0 0
+150 0 0 0 0 0 0 0 0 0
+160 0 0 0 0 0 0 0 0 0
+170 0 0 0 0 0 0 0 0 0
+180 0 0 0 0 0 0 0 0 0
+190 0 0 0 0 0 0 0 0 0
+200 0 0 0 0 0 0 0 0 0
+210 0 0 0 0 0 0 0 0 0
+220 0 0 0 0 0 0 0 0 0
+230 0 0 0 0 0 0 0 0 0
+240 0 0 0 0 0 0 0 0 0
+250 0 0 0 0 0 0 0 0 0
+260 0 0 0 0 0 0 0 0 0
+270 0 0 0 0 0 0 0 0 0
+280 0 0 0 0 0 0 0 0 0
+290 0 0 0 0 0 0 0 0 0
+300 0 0 0 0 0 0 0 0 0
+310 0 0 0 0 0 0 0 0 0
+320 0 0 0 0 0 0 0 0 0
+330 0 0 0 0 0 0 0 0 0
+340 0 0 0 0 0 0 0 0 0
+350 2 0 0 0 0 0 0 0 0
+360 3 0 0 0 0 0 0 0 0
+370 5 0 0 0 0 0 0 0 0
+380 13 0 0 0 0 0 0 0 0
+390 13 0 0 0 0 0 0 0 0
+400 23 0 0 0 0 0 0 0 0
+410 27 0 0 0 0 0 0 0 0
+420 46 0 0 0 0 0 0 0 0
+430 62 0 0 0 0 0 0 0 0
+440 76 0 0 0 0 0 0 0 0
+450 91 0 0 0 0 0 0 0 0
+460 109 0 0 0 0 0 0 0 0
+470 149 0 0 0 0 0 0 0 0
+480 179 0 0 0 0 0 0 0 0
+490 213 0 0 0 0 0 0 0 0
+500 223 0 0 0 0 0 0 0 0
Added: development/tests/_exp_500u/expected/data/tasks_quality.dat
===================================================================
--- development/tests/_exp_500u/expected/data/tasks_quality.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/tasks_quality.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,74 @@
+# Avida tasks quality data
+# Thu Feb 7 10:31:16 2008
+# First column gives the current update, rest give average and max task quality
+# 1: Update
+# 2: Not Average
+# 3: Not Max
+# 4: Nand Average
+# 5: Nand Max
+# 6: And Average
+# 7: And Max
+# 8: OrNot Average
+# 9: OrNot Max
+# 10: Or Average
+# 11: Or Max
+# 12: AndNot Average
+# 13: AndNot Max
+# 14: Nor Average
+# 15: Nor Max
+# 16: Xor Average
+# 17: Xor Max
+# 18: Equals Average
+# 19: Equals Max
+
+0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
+10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+350 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+360 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+370 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+380 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+390 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+400 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+410 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+420 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+430 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+440 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+450 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+460 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+470 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+480 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+490 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
+500 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Added: development/tests/_exp_500u/expected/data/time.dat
===================================================================
--- development/tests/_exp_500u/expected/data/time.dat (rev 0)
+++ development/tests/_exp_500u/expected/data/time.dat 2008-02-07 15:21:26 UTC (rev 2307)
@@ -0,0 +1,58 @@
+# Avida time data
+# Thu Feb 7 10:31:16 2008
+# 1: update
+# 2: avida time
+# 3: average generation
+# 4: num_executed?
+
+0 0.000000 0.000000 30
+10 0.104167 0 30
+20 0.208333 1 60
+30 0.3125 2 120
+40 0.416667 2.85714 210
+50 0.520833 3.125 210
+60 0.625117 3.84615 390
+70 0.72944 4.86364 660
+80 0.835089 5.87179 1140
+90 0.942164 6.46 1440
+100 1.04809 7.08475 1650
+110 1.15607 7.83333 2340
+120 1.26448 8.75962 3090
+130 1.37285 9.72794 3990
+140 1.48137 10.5427 4740
+150 1.58944 11.129 5400
+160 1.69822 11.9136 6510
+170 1.80688 12.8075 7950
+180 1.91571 13.7314 9180
+190 2.02474 14.4986 10410
+200 2.13416 15.2253 11610
+210 2.24337 15.8916 13140
+220 2.35238 16.7408 14580
+230 2.46119 17.7269 16410
+240 2.56986 18.5808 18390
+250 2.67836 19.3763 20190
+260 2.78725 20.1402 22230
+270 2.89586 20.8853 24180
+280 3.00448 21.7228 27060
+290 3.11289 22.6144 29220
+300 3.22105 23.4463 31560
+310 3.3291 24.3004 34020
+320 3.43725 25.0417 36570
+330 3.54519 25.872 39210
+340 3.65283 26.6598 41910
+350 3.7602 27.5167 44640
+360 3.86693 28.3171 47790
+370 3.9733 29.146 51180
+380 4.07928 29.9721 54450
+390 4.1849 30.758 57840
+400 4.29081 31.55 61500
+410 4.3963 32.3797 65130
+420 4.50093 33.2826 69120
+430 4.60456 34.1034 72930
+440 4.70758 34.9059 76560
+450 4.81027 35.7393 80580
+460 4.91227 36.6181 84600
+470 5.01352 37.5324 89100
+480 5.11361 38.3892 93870
+490 5.21325 39.3132 97290
+500 5.31261 40.1671 99990
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