[Avida-cvs] [avida-svn] r889 - in development: Avida.xcodeproj documentation documentation/images source source/analyze source/classification source/cpu source/event source/main source/tools

brysonda at myxo.css.msu.edu brysonda at myxo.css.msu.edu
Wed Aug 23 12:00:12 PDT 2006


Author: brysonda
Date: 2006-08-23 14:54:29 -0400 (Wed, 23 Aug 2006)
New Revision: 889

Added:
   development/documentation/images/cpu2.gif
Removed:
   development/documentation/content/
   development/documentation/cpu2.gif
   development/documentation/screen.html
Modified:
   development/Avida.xcodeproj/project.pbxproj
   development/documentation/cpu_tour.html
   development/documentation/index.html
   development/source/analyze/cAnalyze.cc
   development/source/analyze/cAnalyze.h
   development/source/analyze/cAnalyzeCommand.h
   development/source/analyze/cAnalyzeCommandDef.h
   development/source/analyze/cAnalyzeCommandDefBase.h
   development/source/analyze/cAnalyzeFlowCommand.h
   development/source/analyze/cAnalyzeFlowCommandDef.h
   development/source/analyze/cAnalyzeFunction.h
   development/source/analyze/cAnalyzeGenotype.cc
   development/source/analyze/cAnalyzeGenotype.h
   development/source/analyze/cGenotypeBatch.h
   development/source/classification/cGenotype.cc
   development/source/classification/cGenotype.h
   development/source/classification/cGenotypeControl.cc
   development/source/classification/cGenotypeControl.h
   development/source/classification/cGenotype_BirthData.cc
   development/source/classification/cGenotype_BirthData.h
   development/source/classification/cGenotype_TestData.h
   development/source/classification/cInjectGenotype.cc
   development/source/classification/cInjectGenotype.h
   development/source/classification/cInjectGenotypeControl.cc
   development/source/classification/cInjectGenotypeControl.h
   development/source/classification/cInjectGenotypeElement.h
   development/source/classification/cInjectGenotypeQueue.cc
   development/source/classification/cInjectGenotypeQueue.h
   development/source/classification/cInjectGenotype_BirthData.h
   development/source/classification/cLineage.cc
   development/source/classification/cLineage.h
   development/source/classification/cSpecies.cc
   development/source/classification/cSpecies.h
   development/source/classification/cSpeciesControl.cc
   development/source/classification/cSpeciesControl.h
   development/source/classification/cSpeciesQueue.cc
   development/source/classification/cSpeciesQueue.h
   development/source/cpu/cCPUMemory.cc
   development/source/cpu/cCPUMemory.h
   development/source/cpu/cCPUStack.cc
   development/source/cpu/cCPUStack.h
   development/source/cpu/cCPUTestInfo.cc
   development/source/cpu/cCPUTestInfo.h
   development/source/cpu/cCodeLabel.cc
   development/source/cpu/cCodeLabel.h
   development/source/cpu/cHardwareBase.cc
   development/source/cpu/cHardwareBase.h
   development/source/cpu/cHardwareCPU.cc
   development/source/cpu/cHardwareCPU.h
   development/source/cpu/cHardwareCPU_Thread.cc
   development/source/cpu/cHardwareCPU_Thread.h
   development/source/cpu/cHardwareStatusPrinter.cc
   development/source/cpu/cHardwareStatusPrinter.h
   development/source/cpu/cHardwareTracer.h
   development/source/cpu/cHeadCPU.cc
   development/source/cpu/cHeadCPU.h
   development/source/cpu/cInstLibCPU.h
   development/source/cpu/cTestCPU.cc
   development/source/cpu/cTestCPU.h
   development/source/cpu/cTestUtil.cc
   development/source/cpu/cTestUtil.h
   development/source/cpu/sCPUStats.h
   development/source/cpu/tInstLib.h
   development/source/defs.h
   development/source/event/cEvent.h
   development/source/event/cEventList.cc
   development/source/event/cEventList.h
   development/source/event/cEventListEntry.h
   development/source/event/cEventListIterator.h
   development/source/event/cEventTriggers.cc
   development/source/event/cEventTriggers.h
   development/source/main/MyCodeArrayLessThan.h
   development/source/main/avida.cc
   development/source/main/avida.h
   development/source/main/cAvidaTriggers.h
   development/source/main/cBirthChamber.cc
   development/source/main/cBirthChamber.h
   development/source/main/cEnvironment.cc
   development/source/main/cEnvironment.h
   development/source/main/cFitnessMatrix.cc
   development/source/main/cFitnessMatrix.h
   development/source/main/cGenome.cc
   development/source/main/cGenome.h
   development/source/main/cGenomeUtil.cc
   development/source/main/cGenomeUtil.h
   development/source/main/cInstLibBase.h
   development/source/main/cInstSet.cc
   development/source/main/cInstSet.h
   development/source/main/cInstUtil.cc
   development/source/main/cInstUtil.h
   development/source/main/cInstruction.cc
   development/source/main/cInstruction.h
   development/source/main/cLandscape.cc
   development/source/main/cLandscape.h
   development/source/main/cLocalMutations.cc
   development/source/main/cLocalMutations.h
   development/source/main/cMutation.h
   development/source/main/cMutationLib.cc
   development/source/main/cMutationLib.h
   development/source/main/cMutationRates.cc
   development/source/main/cMutationRates.h
   development/source/main/cMxCodeArray.cc
   development/source/main/cMxCodeArray.h
   development/source/main/cOrgMessage.cc
   development/source/main/cOrgMessage.h
   development/source/main/cOrganism.cc
   development/source/main/cOrganism.h
   development/source/main/cPhenotype.cc
   development/source/main/cPhenotype.h
   development/source/main/cPopulation.cc
   development/source/main/cPopulation.h
   development/source/main/cPopulationCell.cc
   development/source/main/cPopulationCell.h
   development/source/main/cPopulationInterface.cc
   development/source/main/cPopulationInterface.h
   development/source/main/cReaction.cc
   development/source/main/cReaction.h
   development/source/main/cReactionLib.cc
   development/source/main/cReactionLib.h
   development/source/main/cReactionProcess.h
   development/source/main/cReactionRequisite.h
   development/source/main/cReactionResult.cc
   development/source/main/cReactionResult.h
   development/source/main/cResource.cc
   development/source/main/cResource.h
   development/source/main/cResourceCount.cc
   development/source/main/cResourceCount.h
   development/source/main/cResourceLib.cc
   development/source/main/cResourceLib.h
   development/source/main/cSpatialCountElem.cc
   development/source/main/cSpatialCountElem.h
   development/source/main/cSpatialResCount.cc
   development/source/main/cSpatialResCount.h
   development/source/main/cStats.cc
   development/source/main/cStats.h
   development/source/main/cTaskEntry.h
   development/source/main/cTaskLib.cc
   development/source/main/cTaskLib.h
   development/source/tools/cBlockStruct.cc
   development/source/tools/cBlockStruct.h
   development/source/tools/cChangeList.cc
   development/source/tools/cChangeList.h
   development/source/tools/cConstSchedule.cc
   development/source/tools/cConstSchedule.h
   development/source/tools/cCountTracker.h
   development/source/tools/cCycleCheck.cc
   development/source/tools/cCycleCheck.h
   development/source/tools/cDataEntry.h
   development/source/tools/cDataFile.cc
   development/source/tools/cDataFile.h
   development/source/tools/cDataFileManager.cc
   development/source/tools/cDataFileManager.h
   development/source/tools/cDataManager_Base.cc
   development/source/tools/cDataManager_Base.h
   development/source/tools/cDefaultMessageDisplay.cc
   development/source/tools/cDefaultMessageDisplay.h
   development/source/tools/cDoubleSum.cc
   development/source/tools/cDoubleSum.h
   development/source/tools/cFile.h
   development/source/tools/cFixedBlock.h
   development/source/tools/cFixedCoords.h
   development/source/tools/cHelpAlias.cc
   development/source/tools/cHelpAlias.h
   development/source/tools/cHelpEntry.h
   development/source/tools/cHelpFullEntry.h
   development/source/tools/cHelpManager.cc
   development/source/tools/cHelpManager.h
   development/source/tools/cHelpType.cc
   development/source/tools/cHelpType.h
   development/source/tools/cHistogram.cc
   development/source/tools/cHistogram.h
   development/source/tools/cID.h
   development/source/tools/cIndexedBlockStruct.cc
   development/source/tools/cIndexedBlockStruct.h
   development/source/tools/cInitFile.cc
   development/source/tools/cInitFile.h
   development/source/tools/cIntSum.cc
   development/source/tools/cIntSum.h
   development/source/tools/cIntegratedSchedule.cc
   development/source/tools/cIntegratedSchedule.h
   development/source/tools/cIntegratedScheduleNode.cc
   development/source/tools/cIntegratedScheduleNode.h
   development/source/tools/cMerit.cc
   development/source/tools/cMerit.h
   development/source/tools/cMessageClass.h
   development/source/tools/cMessageClosure.h
   development/source/tools/cMessageDisplay.cc
   development/source/tools/cMessageDisplay.h
   development/source/tools/cMessageDisplay_headers.h
   development/source/tools/cMessageType.h
   development/source/tools/cProbSchedule.cc
   development/source/tools/cProbSchedule.h
   development/source/tools/cRandom.cc
   development/source/tools/cRandom.h
   development/source/tools/cRefBlock.h
   development/source/tools/cRunningAverage.cc
   development/source/tools/cRunningAverage.h
   development/source/tools/cScaledBlock.h
   development/source/tools/cSchedule.cc
   development/source/tools/cSchedule.h
   development/source/tools/cString.cc
   development/source/tools/cString.h
   development/source/tools/cStringIterator.cc
   development/source/tools/cStringIterator.h
   development/source/tools/cStringList.cc
   development/source/tools/cStringList.h
   development/source/tools/cStringUtil.cc
   development/source/tools/cStringUtil.h
   development/source/tools/cTools.cc
   development/source/tools/cTools.h
   development/source/tools/cUInt.h
   development/source/tools/cVerifierSuiteRecurser.h
   development/source/tools/cWeightedIndex.cc
   development/source/tools/cWeightedIndex.h
   development/source/tools/functions.h
   development/source/tools/tArgDataEntry.h
   development/source/tools/tArray.h
   development/source/tools/tBuffer.h
   development/source/tools/tDataEntry.h
   development/source/tools/tDataEntryBase.h
   development/source/tools/tDataEntryCommand.h
   development/source/tools/tDataManager.h
   development/source/tools/tDictionary.h
   development/source/tools/tHashTable.h
   development/source/tools/tList.h
   development/source/tools/tMatrix.h
   development/source/tools/tVector.h
   development/source/tools/tVerifierSuite.hh
Log:
Update header comment section of files removing incorrect "Created by David" statements, in favor of previously known as statements, where applicable.   Kept attribution for files I actually created, as should anyone else adding new classes. 

Modified: development/Avida.xcodeproj/project.pbxproj
===================================================================
--- development/Avida.xcodeproj/project.pbxproj	2006-08-23 17:42:42 UTC (rev 888)
+++ development/Avida.xcodeproj/project.pbxproj	2006-08-23 18:54:29 UTC (rev 889)
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+		70920C560A9CCE2C00757CDB /* help.swap.html */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.html.documentation; path = help.swap.html; sourceTree = "<group>"; };
+		70920C570A9CCE2C00757CDB /* help.Tasks.html */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.html.documentation; path = help.Tasks.html; sourceTree = "<group>"; };
+		70920C580A9CCE2C00757CDB /* help.Template.html */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.html.documentation; path = help.Template.html; sourceTree = "<group>"; };
+		70920C590A9CCE2C00757CDB /* inst.help */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text; path = inst.help; sourceTree = "<group>"; };
+		70920C5A0A9CCE2C00757CDB /* notations.help */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text; path = notations.help; sourceTree = "<group>"; };
+		70920C5B0A9CCE2C00757CDB /* todo.help */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text; path = todo.help; sourceTree = "<group>"; };
+		70920C5D0A9CCE2C00757CDB /* AvidaLogo.gif */ = {isa = PBXFileReference; lastKnownFileType = image.gif; path = AvidaLogo.gif; sourceTree = "<group>"; };
+		70920C5E0A9CCE2C00757CDB /* cpu2.gif */ = {isa = PBXFileReference; lastKnownFileType = image.gif; path = cpu2.gif; sourceTree = "<group>"; };
+		70920C5F0A9CCE2C00757CDB /* index.html */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.html.documentation; path = index.html; sourceTree = "<group>"; };
+		70920C600A9CCE2C00757CDB /* inst_set.html */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.html.documentation; path = inst_set.html; sourceTree = "<group>"; };
+		70920C620A9CCE2C00757CDB /* 3.0-notes */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text; path = "3.0-notes"; sourceTree = "<group>"; };
+		70920C630A9CCE2C00757CDB /* inst_set.stack_based */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text; path = inst_set.stack_based; sourceTree = "<group>"; };
+		70920C640A9CCE2C00757CDB /* mutations.cfg */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text; path = mutations.cfg; sourceTree = "<group>"; };
+		70920C650A9CCE2C00757CDB /* release-milestones.txt */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text; path = "release-milestones.txt"; sourceTree = "<group>"; };
+		70920C660A9CCE2C00757CDB /* third-party-osx.xml */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.xml; path = "third-party-osx.xml"; sourceTree = "<group>"; };
+		70920C670A9CCE2C00757CDB /* third-party-win32.xml */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.xml; path = "third-party-win32.xml"; sourceTree = "<group>"; };
+		70920C680A9CCE2C00757CDB /* print_data.html */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.html.documentation; path = print_data.html; sourceTree = "<group>"; };
+		70920C690A9CCE2C00757CDB /* structure.html */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.html.documentation; path = structure.html; sourceTree = "<group>"; };
+		70920C6A0A9CCE2C00757CDB /* svn.html */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = text.html.documentation; path = svn.html; sourceTree = "<group>"; };
 		7093DB4009D6F50300DE7FEB /* tSmartArray.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = tSmartArray.h; sourceTree = "<group>"; };
 		709D92490A5D94FD00D6A163 /* cMutationalNeighborhood.h */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = sourcecode.c.h; path = cMutationalNeighborhood.h; sourceTree = "<group>"; };
 		709D924A0A5D94FD00D6A163 /* cMutationalNeighborhoodResults.h */ = {isa = PBXFileReference; fileEncoding = 30; lastKnownFileType = sourcecode.c.h; path = cMutationalNeighborhoodResults.h; sourceTree = "<group>"; };
@@ -1083,6 +1158,114 @@
 			path = misc;
 			sourceTree = "<group>";
 		};
+		70920C1A0A9CCE2C00757CDB /* Documentation */ = {
+			isa = PBXGroup;
+			children = (
+				70920C1B0A9CCE2C00757CDB /* analyze_mode.html */,
+				70920C1C0A9CCE2C00757CDB /* analyze_samples.html */,
+				70920C1D0A9CCE2C00757CDB /* code_c++_intro.html */,
+				70920C1E0A9CCE2C00757CDB /* code_death_birth.html */,
+				70920C1F0A9CCE2C00757CDB /* code_environment.html */,
+				70920C200A9CCE2C00757CDB /* code_events.html */,
+				70920C210A9CCE2C00757CDB /* code_genesis.html */,
+				70920C220A9CCE2C00757CDB /* code_genome.html */,
+				70920C230A9CCE2C00757CDB /* code_init_file.html */,
+				70920C240A9CCE2C00757CDB /* code_instruction.html */,
+				70920C250A9CCE2C00757CDB /* code_life_cycle.html */,
+				70920C260A9CCE2C00757CDB /* code_task.html */,
+				70920C280A9CCE2C00757CDB /* cpu_tour.html */,
+				70920C290A9CCE2C00757CDB /* environment.html */,
+				70920C2A0A9CCE2C00757CDB /* events.html */,
+				70920C2B0A9CCE2C00757CDB /* genesis.html */,
+				70920C2C0A9CCE2C00757CDB /* glossary */,
+				70920C5C0A9CCE2C00757CDB /* images */,
+				70920C5F0A9CCE2C00757CDB /* index.html */,
+				70920C600A9CCE2C00757CDB /* inst_set.html */,
+				70920C610A9CCE2C00757CDB /* notes */,
+				70920C680A9CCE2C00757CDB /* print_data.html */,
+				70920C690A9CCE2C00757CDB /* structure.html */,
+				70920C6A0A9CCE2C00757CDB /* svn.html */,
+			);
+			name = Documentation;
+			path = documentation;
+			sourceTree = "<group>";
+		};
+		70920C2C0A9CCE2C00757CDB /* glossary */ = {
+			isa = PBXGroup;
+			children = (
+				70920C2D0A9CCE2C00757CDB /* components.help */,
+				70920C2E0A9CCE2C00757CDB /* help.add.html */,
+				70920C2F0A9CCE2C00757CDB /* help.Bitwise.html */,
+				70920C300A9CCE2C00757CDB /* help.Complement-Template.html */,
+				70920C310A9CCE2C00757CDB /* help.CPU-cycle.html */,
+				70920C320A9CCE2C00757CDB /* help.CPU.html */,
+				70920C330A9CCE2C00757CDB /* help.dec.html */,
+				70920C340A9CCE2C00757CDB /* help.Genome.html */,
+				70920C350A9CCE2C00757CDB /* help.Genotype.html */,
+				70920C360A9CCE2C00757CDB /* help.h-alloc.html */,
+				70920C370A9CCE2C00757CDB /* help.h-copy.html */,
+				70920C380A9CCE2C00757CDB /* help.h-divide.html */,
+				70920C390A9CCE2C00757CDB /* help.h-search.html */,
+				70920C3A0A9CCE2C00757CDB /* help.Heads.html */,
+				70920C3B0A9CCE2C00757CDB /* help.if-label.html */,
+				70920C3C0A9CCE2C00757CDB /* help.if-less.html */,
+				70920C3D0A9CCE2C00757CDB /* help.if-n-equ.html */,
+				70920C3E0A9CCE2C00757CDB /* help.inc.html */,
+				70920C3F0A9CCE2C00757CDB /* help.Input-Output.html */,
+				70920C400A9CCE2C00757CDB /* help.Instruction.html */,
+				70920C410A9CCE2C00757CDB /* help.IO.html */,
+				70920C420A9CCE2C00757CDB /* help.jmp-head.html */,
+				70920C430A9CCE2C00757CDB /* help.Logic.html */,
+				70920C440A9CCE2C00757CDB /* help.Memory.html */,
+				70920C450A9CCE2C00757CDB /* help.mov-head.html */,
+				70920C460A9CCE2C00757CDB /* help.Mutation.html */,
+				70920C470A9CCE2C00757CDB /* help.nand.html */,
+				70920C480A9CCE2C00757CDB /* help.Nop-Head-Notation.html */,
+				70920C490A9CCE2C00757CDB /* help.nop-instructions.html */,
+				70920C4A0A9CCE2C00757CDB /* help.Nop-Register-Notation.html */,
+				70920C4B0A9CCE2C00757CDB /* help.Organism.html */,
+				70920C4C0A9CCE2C00757CDB /* help.pop.html */,
+				70920C4D0A9CCE2C00757CDB /* help.Population.html */,
+				70920C4E0A9CCE2C00757CDB /* help.push.html */,
+				70920C4F0A9CCE2C00757CDB /* help.Registers.html */,
+				70920C500A9CCE2C00757CDB /* help.set-flow.html */,
+				70920C510A9CCE2C00757CDB /* help.shift-l.html */,
+				70920C520A9CCE2C00757CDB /* help.shift-r.html */,
+				70920C530A9CCE2C00757CDB /* help.Stack.html */,
+				70920C540A9CCE2C00757CDB /* help.sub.html */,
+				70920C550A9CCE2C00757CDB /* help.swap-stk.html */,
+				70920C560A9CCE2C00757CDB /* help.swap.html */,
+				70920C570A9CCE2C00757CDB /* help.Tasks.html */,
+				70920C580A9CCE2C00757CDB /* help.Template.html */,
+				70920C590A9CCE2C00757CDB /* inst.help */,
+				70920C5A0A9CCE2C00757CDB /* notations.help */,
+				70920C5B0A9CCE2C00757CDB /* todo.help */,
+			);
+			path = glossary;
+			sourceTree = "<group>";
+		};
+		70920C5C0A9CCE2C00757CDB /* images */ = {
+			isa = PBXGroup;
+			children = (
+				70920C5D0A9CCE2C00757CDB /* AvidaLogo.gif */,
+				70920C5E0A9CCE2C00757CDB /* cpu2.gif */,
+			);
+			path = images;
+			sourceTree = "<group>";
+		};
+		70920C610A9CCE2C00757CDB /* notes */ = {
+			isa = PBXGroup;
+			children = (
+				70920C620A9CCE2C00757CDB /* 3.0-notes */,
+				70920C630A9CCE2C00757CDB /* inst_set.stack_based */,
+				70920C640A9CCE2C00757CDB /* mutations.cfg */,
+				70920C650A9CCE2C00757CDB /* release-milestones.txt */,
+				70920C660A9CCE2C00757CDB /* third-party-osx.xml */,
+				70920C670A9CCE2C00757CDB /* third-party-win32.xml */,
+			);
+			path = notes;
+			sourceTree = "<group>";
+		};
 		70DCAC54097AF730002F8733 /* targets */ = {
 			isa = PBXGroup;
 			children = (
@@ -1242,13 +1425,13 @@
 			isa = PBXGroup;
 			children = (
 				DCC30C670762539A008F7A48 /* Main Source */,
+				70920C1A0A9CCE2C00757CDB /* Documentation */,
 				707AF2D209EE8501001AEA89 /* Support */,
 				DCC315B6076253A5008F7A48 /* Utilities */,
 				DCC3164E07626CF3008F7A48 /* Products */,
 				70FB86A908BFAFEC00BDF589 /* CMakeLists.txt */,
 				70658C59085DF67D00486BED /* libncurses.5.4.dylib */,
 				703CA3780A50749F00AB4DB4 /* SConstruct */,
-				703F684207B437B800C1CA76 /* status.xml */,
 			);
 			sourceTree = "<group>";
 		};

Deleted: development/documentation/cpu2.gif
===================================================================
(Binary files differ)

Modified: development/documentation/cpu_tour.html
===================================================================
--- development/documentation/cpu_tour.html	2006-08-23 17:42:42 UTC (rev 888)
+++ development/documentation/cpu_tour.html	2006-08-23 18:54:29 UTC (rev 889)
@@ -50,7 +50,7 @@
 </ul>
 
 <div align="center">
-<img src="cpu2.gif" />
+<img src="images/cpu2.gif" />
 </div>
 
 <p>&nbsp;</p>

Copied: development/documentation/images/cpu2.gif (from rev 886, development/documentation/cpu2.gif)

Modified: development/documentation/index.html
===================================================================
--- development/documentation/index.html	2006-08-23 17:42:42 UTC (rev 888)
+++ development/documentation/index.html	2006-08-23 18:54:29 UTC (rev 889)
@@ -5,10 +5,17 @@
 <body>
 
 <div align="center">
-<h1>Index of Avida Documentation</h1>
+<table border="0">
+<tr>
+<td><img src="images/AvidaLogo.gif" /></td>
+<td><h1>The Avida Digital Life Platform</h1></td>
+</tr>
+</table>
 </div>
 
-This file catalogs the available documentation about the avida system.
+<p>
+This file catalogs the available documentation about the Avida system.
+</p>
 
 <h2>General Information</h2>
 
@@ -46,12 +53,5 @@
 <br /><a href="code_environment.html">The Environment Source Code</a>
 </p>
 
-
-<h2>Other Tools</h2>
-
-<p>
-<a href="screen.html">The "screen" Virtual Terminal</a>
-</p>
-
 </body>
 </html>

Deleted: development/documentation/screen.html
===================================================================
--- development/documentation/screen.html	2006-08-23 17:42:42 UTC (rev 888)
+++ development/documentation/screen.html	2006-08-23 18:54:29 UTC (rev 889)
@@ -1,127 +0,0 @@
-<html>
-<title>Using the screen program</title>
-<body
- bgcolor="#FFFFFF"
- text="#000000"
- link="#0000AA"
- alink="#0000FF"
- vlink="#000044">
-
-<h2 align=center>Using the screen program</h2>
-
-<p>
-The "screen" program can be used whenever you want to log out of a remote
-Linux account, but you want another program that you are running (in our case,
-Avida) to keep running even after you've logged out.  You may not need to use
-this immediately, but its good to know that its available.  Screen is
-basically a virtual terminal -- you start it up, and it looks like the same
-terminal as before, but now you can "detach" it and "resume" it later.  This
-is best shown by a demonstration.
-
-<h3>Screen Walkthrough</h3>
-
-<p>
-To start the screen program, simply type
-<p>
-&nbsp;&nbsp;&nbsp;<tt>screen</tt>
-
-<p>
-from the command line.  You
-should see your command line prompt appear on a nice empty screen.  Next,
-go into your avida work directory and start a run.  If you put avida in
-your home directory, you would type:
-
-<p>
-&nbsp;&nbsp;&nbsp;<tt>cd ~/avida/current/work/</tt><br>
-&nbsp;&nbsp;&nbsp;<tt>primitive</tt><br>
-
-<p>
-Now once the run is going, you want to detach it.  Screen intercepts
-CTRL-A whenever you press it, and waits for the next keystroke to find out
-what it should do.  Watch out because this may be confusing if you are using
-another program that you intended the CTRL-A to affect.  In any case, to
-detach the screen, you should press CTRL-A followed by the lowercase letter
-'d'. (note that you press one, and then the other, not all at once).
-
-<p>
-&nbsp;&nbsp;&nbsp;<tt>[CTRL-A] d</tt><br>
-
-<p>
-The avida run should disappear, and you should be back at the command
-line where you first ran screen, and now it will say "<tt>[detached]</tt>"
-at the bottom of the screen.
-
-<p>
-You can even log out and log back in now if you like.  Whenever you are 
-ready to get back to your avida run, from the command line, type:
-
-<p>
-&nbsp;&nbsp;&nbsp;<tt>screen -r</tt><br>
-
-<p>
-This tells screen to resume where it left off before.  Notice that updates
-have continued to go by in Avida while you weren't connected.
-
-<p>
-There are two ways of issuing commands to screen.  The first, we've already
-explained -- when you are in screen, you simply press CTRL-A and then the
-key that corresponds to the command you wish screen to perform.  The second
-way is when you're not in screen.  Then you need to type "<tt>screen</tt>"
-followed by a dash ('-') and the letter that corresponds to the command.
-
-<p>
-For example, imagine that I start up an avida run in a screen session, but
-I forgot to detach it before I went home.  Now that I'm home, I want to
-see how my avida run is going.  What I can do is log onto the remote Linux
-machine from home, type "<tt>screen&nbsp;-d</tt>" at the command line, and
-my screen session running elsewhere one that remote screen will detach.  I
-can now type "<tt>screen&nbsp;-r</tt>" from where I am, and I'll be back
-in my screen session.
-
-<p>
-This explanation just touches on some of the abilities of screen.  In
-practice, I tend to run a screen session an do much of my work in it.  Then
-when I want to work somewhere else, I don't have to setup everything all 
-over again -- I resume my screen session and I'm already right where I left
-off.
-
-<p>
-Below, I will go into some of the other abilities of screen.
-
-
-<h3>Screen Command Summary</h3>
-
-<p>
-Below is a list of commands that you can issue from within screen.  Press
-CTRL-A and then the corresponding command key to get the effect.
-
-<p>
-<table cellpadding=5>
-<tr><th>d
-    <td>Detach the current screen session
-<tr><th>c
-    <td>Create a new screen session.  This new session will give you a brand
-        new command line.  You can have up to 10 screen session at a time.
-<tr><th>[SPACE]&nbsp;&nbsp;&nbsp;
-    <td>Toggle between screen sessions.
-<tr><th>k
-    <td>Kill the current screen session (but leave the rest running)
-<tr><th>?
-    <td>Get a list of all possible screen commands.
-</table>
-
-<p>
-If you want to get to the official documentation that comes with screen,
-you should go to the command line and type:
-
-<p>
-&nbsp;&nbsp;&nbsp;<tt>info screen</tt><br>
-
-<p>
-You can then use the arrow keys to move the cursor around on the screen, and
-press enter on a link to obtain more information on a topic.
-
-<br><hr>
-Project hosted by:<br>
-<a href="http://sourceforge.net"><img src="http://sourceforge.net/sflogo.php?group_id=46761&type=2" width="125" height="37" border="0" alt="SourceForge.net"/></a>
-    
\ No newline at end of file

Modified: development/source/analyze/cAnalyze.cc
===================================================================
--- development/source/analyze/cAnalyze.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyze.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyze.cc
  *  Avida
  *
- *  Created by David on 12/1/05.
+ *  Called "analyze.cc" prior to 12/1/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyze.h
===================================================================
--- development/source/analyze/cAnalyze.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyze.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyze.h
  *  Avida
  *
- *  Created by David on 12/1/05.
+ *  Called "analyze.hh" prior to 12/1/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyzeCommand.h
===================================================================
--- development/source/analyze/cAnalyzeCommand.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyzeCommand.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyzeCommand.h
  *  Avida
  *
- *  Created by David on 12/1/05.
+ *  Called "analyze_command.hh" prior to 12/1/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyzeCommandDef.h
===================================================================
--- development/source/analyze/cAnalyzeCommandDef.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyzeCommandDef.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyzeCommandDef.h
  *  Avida
  *
- *  Created by David on 12/1/05.
+ *  Called "analyze_command_def.hh" prior to 12/1/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyzeCommandDefBase.h
===================================================================
--- development/source/analyze/cAnalyzeCommandDefBase.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyzeCommandDefBase.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyzeCommandDefBase.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "analyze_command_def_base.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyzeFlowCommand.h
===================================================================
--- development/source/analyze/cAnalyzeFlowCommand.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyzeFlowCommand.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyzeFlowCommand.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "analyze_flow_command.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyzeFlowCommandDef.h
===================================================================
--- development/source/analyze/cAnalyzeFlowCommandDef.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyzeFlowCommandDef.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyzeFlowCommandDef.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "analyze_flow_command_def.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyzeFunction.h
===================================================================
--- development/source/analyze/cAnalyzeFunction.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyzeFunction.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyzeFunction.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "analyze_function.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyzeGenotype.cc
===================================================================
--- development/source/analyze/cAnalyzeGenotype.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyzeGenotype.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyzeGenotype.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "analyze_genotype.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cAnalyzeGenotype.h
===================================================================
--- development/source/analyze/cAnalyzeGenotype.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cAnalyzeGenotype.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAnalyzeGenotype.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "analyze_genotype.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/analyze/cGenotypeBatch.h
===================================================================
--- development/source/analyze/cGenotypeBatch.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/analyze/cGenotypeBatch.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenotypeBatch.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "genotype_batch.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cGenotype.cc
===================================================================
--- development/source/classification/cGenotype.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cGenotype.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenotype.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "genotype.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/classification/cGenotype.h
===================================================================
--- development/source/classification/cGenotype.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cGenotype.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenotype.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "genotype.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/classification/cGenotypeControl.cc
===================================================================
--- development/source/classification/cGenotypeControl.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cGenotypeControl.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenotypeControl.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "genotype_control.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/classification/cGenotypeControl.h
===================================================================
--- development/source/classification/cGenotypeControl.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cGenotypeControl.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenotypeControl.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "genotype_control.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/classification/cGenotype_BirthData.cc
===================================================================
--- development/source/classification/cGenotype_BirthData.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cGenotype_BirthData.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenotype_BirthData.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "genotype_birth_data.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/classification/cGenotype_BirthData.h
===================================================================
--- development/source/classification/cGenotype_BirthData.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cGenotype_BirthData.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenotype_BirthData.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "genotype_birth_data.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/classification/cGenotype_TestData.h
===================================================================
--- development/source/classification/cGenotype_TestData.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cGenotype_TestData.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenotype_TestData.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "genotype_test_data.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/classification/cInjectGenotype.cc
===================================================================
--- development/source/classification/cInjectGenotype.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cInjectGenotype.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInjectGenotype.cc
  *  Avida
  *
- *  Created by David on 11/15/05.
+ *  Called "inject_genotype.cc" prior to 11/15/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cInjectGenotype.h
===================================================================
--- development/source/classification/cInjectGenotype.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cInjectGenotype.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInjectGenotype.h
  *  Avida
  *
- *  Created by David on 11/15/05.
+ *  Called "inject_genotype.hh" prior to 11/15/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cInjectGenotypeControl.cc
===================================================================
--- development/source/classification/cInjectGenotypeControl.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cInjectGenotypeControl.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInjectGenotypeControl.cc
  *  Avida
  *
- *  Created by David on 11/15/05.
+ *  Called "inject_genotype_control.cc" prior to 11/15/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cInjectGenotypeControl.h
===================================================================
--- development/source/classification/cInjectGenotypeControl.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cInjectGenotypeControl.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInjectGenotypeControl.h
  *  Avida
  *
- *  Created by David on 11/15/05.
+ *  Called "inject_genotype_control.hh" prior to 11/15/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cInjectGenotypeElement.h
===================================================================
--- development/source/classification/cInjectGenotypeElement.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cInjectGenotypeElement.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInjectGenotypeElement.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "inject_genotype_element.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cInjectGenotypeQueue.cc
===================================================================
--- development/source/classification/cInjectGenotypeQueue.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cInjectGenotypeQueue.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInjectGenotypeQueue.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "inject_genotype_queue.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cInjectGenotypeQueue.h
===================================================================
--- development/source/classification/cInjectGenotypeQueue.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cInjectGenotypeQueue.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInjectGenotypeQueue.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "inject_genotype_queue.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cInjectGenotype_BirthData.h
===================================================================
--- development/source/classification/cInjectGenotype_BirthData.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cInjectGenotype_BirthData.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInjectGenotype_BirthData.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "inject_genotype_birth_data.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/classification/cLineage.cc
===================================================================
--- development/source/classification/cLineage.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cLineage.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cLineage.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "lineage.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/classification/cLineage.h
===================================================================
--- development/source/classification/cLineage.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cLineage.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cLineage.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "lineage.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/classification/cSpecies.cc
===================================================================
--- development/source/classification/cSpecies.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cSpecies.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpecies.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "species.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/classification/cSpecies.h
===================================================================
--- development/source/classification/cSpecies.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cSpecies.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpecies.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "species.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/classification/cSpeciesControl.cc
===================================================================
--- development/source/classification/cSpeciesControl.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cSpeciesControl.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpeciesControl.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "species_control.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cSpeciesControl.h
===================================================================
--- development/source/classification/cSpeciesControl.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cSpeciesControl.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpeciesControl.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "species_control.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cSpeciesQueue.cc
===================================================================
--- development/source/classification/cSpeciesQueue.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cSpeciesQueue.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpeciesQueue.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "species_queue.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/classification/cSpeciesQueue.h
===================================================================
--- development/source/classification/cSpeciesQueue.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/classification/cSpeciesQueue.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpeciesQueue.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "species_queue" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cCPUMemory.cc
===================================================================
--- development/source/cpu/cCPUMemory.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cCPUMemory.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cCPUMemory.cc
  *  Avida
  *
- *  Created by David on 11/22/05.
+ *  Called "cpu_memory.cc" prior to 11/22/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cCPUMemory.h
===================================================================
--- development/source/cpu/cCPUMemory.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cCPUMemory.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cCPUMemory.h
  *  Avida
  *
- *  Created by David on 11/22/05.
+ *  Called "cpu_memory.hh" prior to 11/22/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cCPUStack.cc
===================================================================
--- development/source/cpu/cCPUStack.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cCPUStack.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cCPUStack.cc
  *  Avida
  *
- *  Created by David on 11/17/05.
+ *  Called "cpu_stack.cc" prior to 11/17/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2001 California Institute of Technology.
  *

Modified: development/source/cpu/cCPUStack.h
===================================================================
--- development/source/cpu/cCPUStack.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cCPUStack.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cCPUStack.h
  *  Avida
  *
- *  Created by David on 11/17/05.
+ *  Called "cpu_stack.hh" prior to 11/17/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2001 California Institute of Technology.
  *

Modified: development/source/cpu/cCPUTestInfo.cc
===================================================================
--- development/source/cpu/cCPUTestInfo.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cCPUTestInfo.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cCPUTestInfo.h
  *  Avida
  *
- *  Created by David on 11/29/05.
+ *  Called "cpu_test_info.hh" prior to 11/29/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cCPUTestInfo.h
===================================================================
--- development/source/cpu/cCPUTestInfo.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cCPUTestInfo.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cCPUTestInfo.h
  *  Avida
  *
- *  Created by David on 11/29/05.
+ *  Called "cpu_test_info.hh" prior to 11/29/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cCodeLabel.cc
===================================================================
--- development/source/cpu/cCodeLabel.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cCodeLabel.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cCodeLabel.cc
  *  Avida
  *
- *  Created by David on 11/22/05.
+ *  Called "code_label.cc" prior to 11/22/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cCodeLabel.h
===================================================================
--- development/source/cpu/cCodeLabel.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cCodeLabel.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cCodeLabel.h
  *  Avida
  *
- *  Created by David on 11/22/05.
+ *  Called "code_label.hh" prior to 11/22/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareBase.cc
===================================================================
--- development/source/cpu/cHardwareBase.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareBase.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareBase.cc
  *  Avida
  *
- *  Created by David on 11/17/05.
+ *  Called "hardware_base.cc" prior to 11/17/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareBase.h
===================================================================
--- development/source/cpu/cHardwareBase.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareBase.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareBase.h
  *  Avida
  *
- *  Created by David on 11/17/05.
+ *  Called "hardware_base.hh" prior to 11/17/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareCPU.cc
===================================================================
--- development/source/cpu/cHardwareCPU.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareCPU.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareCPU.cc
  *  Avida
  *
- *  Created by David on 11/17/05.
+ *  Called "hardware_cpu.cc" prior to 11/17/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareCPU.h
===================================================================
--- development/source/cpu/cHardwareCPU.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareCPU.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareCPU.h
  *  Avida
  *
- *  Created by David on 11/17/05.
+ *  Called "hardware_cpu.hh" prior to 11/17/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareCPU_Thread.cc
===================================================================
--- development/source/cpu/cHardwareCPU_Thread.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareCPU_Thread.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareCPU_Thread.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "hardware_cpu_thread.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareCPU_Thread.h
===================================================================
--- development/source/cpu/cHardwareCPU_Thread.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareCPU_Thread.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareCPU_Thread.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "hardware_cpu_thread.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareStatusPrinter.cc
===================================================================
--- development/source/cpu/cHardwareStatusPrinter.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareStatusPrinter.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareStatusPrinter.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "hardware_status_printer.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2004 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareStatusPrinter.h
===================================================================
--- development/source/cpu/cHardwareStatusPrinter.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareStatusPrinter.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareStatusPrinter.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "hardware_status_printer.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2004 California Institute of Technology.
  *

Modified: development/source/cpu/cHardwareTracer.h
===================================================================
--- development/source/cpu/cHardwareTracer.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHardwareTracer.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHardwareTracer.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "hardware_tracer.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2004 California Institute of Technology.
  *

Modified: development/source/cpu/cHeadCPU.cc
===================================================================
--- development/source/cpu/cHeadCPU.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHeadCPU.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHeadCPU.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "head_cpu.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cHeadCPU.h
===================================================================
--- development/source/cpu/cHeadCPU.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cHeadCPU.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHeadCPU.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "head_cpu.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cInstLibCPU.h
===================================================================
--- development/source/cpu/cInstLibCPU.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cInstLibCPU.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInstLibCPU.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "inst_lib_cpu.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *
  */

Modified: development/source/cpu/cTestCPU.cc
===================================================================
--- development/source/cpu/cTestCPU.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cTestCPU.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTestCPU.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "test_cpu.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cTestCPU.h
===================================================================
--- development/source/cpu/cTestCPU.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cTestCPU.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTestCPU.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "test_cpu.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cTestUtil.cc
===================================================================
--- development/source/cpu/cTestUtil.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cTestUtil.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTestUtil.cc
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "test_util.cc" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/cTestUtil.h
===================================================================
--- development/source/cpu/cTestUtil.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/cTestUtil.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTestUtil.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "test_util.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/sCPUStats.h
===================================================================
--- development/source/cpu/sCPUStats.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/sCPUStats.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  sCPUStats.h
  *  Avida
  *
- *  Created by David on 11/30/05.
+ *  Called "cpu_stats.hh" prior to 11/30/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1999-2003 California Institute of Technology.
  *

Modified: development/source/cpu/tInstLib.h
===================================================================
--- development/source/cpu/tInstLib.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/cpu/tInstLib.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tInstLib.h
  *  Avida
  *
- *  Created by David on 6/4/05.
+ *  Called "tInstLib.hh" prior to 6/4/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *
  */

Modified: development/source/defs.h
===================================================================
--- development/source/defs.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/defs.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  defs.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "defs.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/event/cEvent.h
===================================================================
--- development/source/event/cEvent.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/event/cEvent.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEvent.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "event.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/event/cEventList.cc
===================================================================
--- development/source/event/cEventList.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/event/cEventList.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEventList.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "event_list.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/event/cEventList.h
===================================================================
--- development/source/event/cEventList.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/event/cEventList.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEventList.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "event_list.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/event/cEventListEntry.h
===================================================================
--- development/source/event/cEventListEntry.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/event/cEventListEntry.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEventListEntry.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "event_list_entry.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/event/cEventListIterator.h
===================================================================
--- development/source/event/cEventListIterator.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/event/cEventListIterator.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEventListIterator.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "event_list_iterator.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/event/cEventTriggers.cc
===================================================================
--- development/source/event/cEventTriggers.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/event/cEventTriggers.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEventTriggers.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "event_triggers.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/event/cEventTriggers.h
===================================================================
--- development/source/event/cEventTriggers.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/event/cEventTriggers.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEventTriggers.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "event_triggers.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/MyCodeArrayLessThan.h
===================================================================
--- development/source/main/MyCodeArrayLessThan.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/MyCodeArrayLessThan.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  MyCodeArrayLessThan.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "my_code_array_less_than.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/avida.cc
===================================================================
--- development/source/main/avida.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/avida.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,6 @@
  *  avida.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/avida.h
===================================================================
--- development/source/main/avida.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/avida.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  avida.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "avida.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cAvidaTriggers.h
===================================================================
--- development/source/main/cAvidaTriggers.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cAvidaTriggers.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cAvidaTriggers.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "avida_trigggers.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cBirthChamber.cc
===================================================================
--- development/source/main/cBirthChamber.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cBirthChamber.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cBirthChamber.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "birth_chamber.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cBirthChamber.h
===================================================================
--- development/source/main/cBirthChamber.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cBirthChamber.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cBirthChamber.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "birth_chamber.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cEnvironment.cc
===================================================================
--- development/source/main/cEnvironment.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cEnvironment.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEnvironment.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "environment.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cEnvironment.h
===================================================================
--- development/source/main/cEnvironment.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cEnvironment.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cEnvironment.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "environment.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cFitnessMatrix.cc
===================================================================
--- development/source/main/cFitnessMatrix.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cFitnessMatrix.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cFitnessMatrix.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "fitness_matrix.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cFitnessMatrix.h
===================================================================
--- development/source/main/cFitnessMatrix.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cFitnessMatrix.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cFitnessMatrix.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "fitness_matrix.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cGenome.cc
===================================================================
--- development/source/main/cGenome.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cGenome.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenome.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "genome.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cGenome.h
===================================================================
--- development/source/main/cGenome.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cGenome.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenome.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "genome.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cGenomeUtil.cc
===================================================================
--- development/source/main/cGenomeUtil.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cGenomeUtil.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenomeUtil.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "genome_util.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cGenomeUtil.h
===================================================================
--- development/source/main/cGenomeUtil.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cGenomeUtil.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cGenomeUtil.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "genome_util.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cInstLibBase.h
===================================================================
--- development/source/main/cInstLibBase.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cInstLibBase.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -1,8 +1,8 @@
 /*
- *  cGenomeUtil.h
+ *  cInstLibBase.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "inst_lib_base.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cInstSet.cc
===================================================================
--- development/source/main/cInstSet.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cInstSet.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInstSet.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "inst_set.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cInstSet.h
===================================================================
--- development/source/main/cInstSet.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cInstSet.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInstSet.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "inst_set.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cInstUtil.cc
===================================================================
--- development/source/main/cInstUtil.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cInstUtil.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInstUtil.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "inst_util.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cInstUtil.h
===================================================================
--- development/source/main/cInstUtil.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cInstUtil.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInstUtil.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "inst_util.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cInstruction.cc
===================================================================
--- development/source/main/cInstruction.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cInstruction.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInstruction.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "inst.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cInstruction.h
===================================================================
--- development/source/main/cInstruction.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cInstruction.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInstruction.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "inst.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cLandscape.cc
===================================================================
--- development/source/main/cLandscape.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cLandscape.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cLandscape.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "landscape.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cLandscape.h
===================================================================
--- development/source/main/cLandscape.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cLandscape.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cLandscape.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "landscape.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cLocalMutations.cc
===================================================================
--- development/source/main/cLocalMutations.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cLocalMutations.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cLocalMutations.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "local_mutations.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cLocalMutations.h
===================================================================
--- development/source/main/cLocalMutations.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cLocalMutations.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cLocalMutations.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "local_mutations.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cMutation.h
===================================================================
--- development/source/main/cMutation.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cMutation.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMutation.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "mutation.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cMutationLib.cc
===================================================================
--- development/source/main/cMutationLib.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cMutationLib.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMutationLib.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "mutation_lib.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cMutationLib.h
===================================================================
--- development/source/main/cMutationLib.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cMutationLib.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMutationLib.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "mutation_lib.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cMutationRates.cc
===================================================================
--- development/source/main/cMutationRates.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cMutationRates.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMutationRates.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "mutation_rates.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cMutationRates.h
===================================================================
--- development/source/main/cMutationRates.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cMutationRates.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMutationRates.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "mutation_rates.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cMxCodeArray.cc
===================================================================
--- development/source/main/cMxCodeArray.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cMxCodeArray.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMxCodeArray.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "mx_code_array.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cMxCodeArray.h
===================================================================
--- development/source/main/cMxCodeArray.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cMxCodeArray.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMxCodeArray.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "mx_code_array.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cOrgMessage.cc
===================================================================
--- development/source/main/cOrgMessage.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cOrgMessage.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cOrgMessage.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "org_message.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cOrgMessage.h
===================================================================
--- development/source/main/cOrgMessage.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cOrgMessage.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cOrgMessage.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "org_message.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cOrganism.cc
===================================================================
--- development/source/main/cOrganism.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cOrganism.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cOrganism.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "organism.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cOrganism.h
===================================================================
--- development/source/main/cOrganism.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cOrganism.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cOrganism.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "organism.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cPhenotype.cc
===================================================================
--- development/source/main/cPhenotype.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cPhenotype.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cPhenotype.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "phenotype.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cPhenotype.h
===================================================================
--- development/source/main/cPhenotype.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cPhenotype.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cPhenotype.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "phenotype.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cPopulation.cc
===================================================================
--- development/source/main/cPopulation.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cPopulation.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cPopulation.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "population.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cPopulation.h
===================================================================
--- development/source/main/cPopulation.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cPopulation.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cPopulation.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "population.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cPopulationCell.cc
===================================================================
--- development/source/main/cPopulationCell.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cPopulationCell.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cPopulationCell.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "pop_cell.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cPopulationCell.h
===================================================================
--- development/source/main/cPopulationCell.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cPopulationCell.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cPopulationCell.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "pop_cell.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cPopulationInterface.cc
===================================================================
--- development/source/main/cPopulationInterface.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cPopulationInterface.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cPopulationInterface.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "pop_interface.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cPopulationInterface.h
===================================================================
--- development/source/main/cPopulationInterface.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cPopulationInterface.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cPopulationInterface.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "pop_interface.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cReaction.cc
===================================================================
--- development/source/main/cReaction.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cReaction.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cReaction.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "reaction.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cReaction.h
===================================================================
--- development/source/main/cReaction.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cReaction.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cReaction.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "reaction.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2004 California Institute of Technology.
  *

Modified: development/source/main/cReactionLib.cc
===================================================================
--- development/source/main/cReactionLib.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cReactionLib.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cReactionLib.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "reaction_lib.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cReactionLib.h
===================================================================
--- development/source/main/cReactionLib.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cReactionLib.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cReactionLib.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "reaction_lib.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cReactionProcess.h
===================================================================
--- development/source/main/cReactionProcess.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cReactionProcess.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cReactionProcess.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "reaction_process.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2004 California Institute of Technology.
  *

Modified: development/source/main/cReactionRequisite.h
===================================================================
--- development/source/main/cReactionRequisite.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cReactionRequisite.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cReactionRequisite.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "reaction_requisite.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cReactionResult.cc
===================================================================
--- development/source/main/cReactionResult.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cReactionResult.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cReactionResult.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "reaction_result.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2004 California Institute of Technology.
  *

Modified: development/source/main/cReactionResult.h
===================================================================
--- development/source/main/cReactionResult.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cReactionResult.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cReactionResult.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "reaction_result.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2004 California Institute of Technology.
  *

Modified: development/source/main/cResource.cc
===================================================================
--- development/source/main/cResource.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cResource.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cResource.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "resource.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cResource.h
===================================================================
--- development/source/main/cResource.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cResource.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cResource.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "resource.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cResourceCount.cc
===================================================================
--- development/source/main/cResourceCount.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cResourceCount.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cResourceCount.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "resource_count.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cResourceCount.h
===================================================================
--- development/source/main/cResourceCount.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cResourceCount.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cResourceCount.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "resource_count.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cResourceLib.cc
===================================================================
--- development/source/main/cResourceLib.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cResourceLib.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cResourceLib.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "resource_lib.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cResourceLib.h
===================================================================
--- development/source/main/cResourceLib.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cResourceLib.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cResourceLib.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "resource_lib.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cSpatialCountElem.cc
===================================================================
--- development/source/main/cSpatialCountElem.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cSpatialCountElem.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpatialCountElem.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "spatial_count_elem.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cSpatialCountElem.h
===================================================================
--- development/source/main/cSpatialCountElem.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cSpatialCountElem.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpatialCountElem.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "spatial_count_elem.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cSpatialResCount.cc
===================================================================
--- development/source/main/cSpatialResCount.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cSpatialResCount.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpatialResCount.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "spatial_res_count.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cSpatialResCount.h
===================================================================
--- development/source/main/cSpatialResCount.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cSpatialResCount.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSpatialResCount.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "spatial_res_count.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cStats.cc
===================================================================
--- development/source/main/cStats.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cStats.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cStats.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "stats.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology.
  *

Modified: development/source/main/cStats.h
===================================================================
--- development/source/main/cStats.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cStats.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cStats.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "stats.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2002 California Institute of Technology.
  *

Modified: development/source/main/cTaskEntry.h
===================================================================
--- development/source/main/cTaskEntry.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cTaskEntry.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTaskEntry.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "task_entry.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cTaskLib.cc
===================================================================
--- development/source/main/cTaskLib.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cTaskLib.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTaskLib.cc
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "task_lib.cc" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/main/cTaskLib.h
===================================================================
--- development/source/main/cTaskLib.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/main/cTaskLib.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTaskLib.h
  *  Avida
  *
- *  Created by David on 12/5/05.
+ *  Called "task_lib.hh" prior to 12/5/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cBlockStruct.cc
===================================================================
--- development/source/tools/cBlockStruct.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cBlockStruct.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cBlockStruct.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "block_struct.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cBlockStruct.h
===================================================================
--- development/source/tools/cBlockStruct.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cBlockStruct.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cBlockStruct.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "block_struct.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cChangeList.cc
===================================================================
--- development/source/tools/cChangeList.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cChangeList.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cChangeList.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "change_list.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2005 California Institute of Technology.
  *

Modified: development/source/tools/cChangeList.h
===================================================================
--- development/source/tools/cChangeList.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cChangeList.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cChangeList.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "change_list.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2005 California Institute of Technology.
  *

Modified: development/source/tools/cConstSchedule.cc
===================================================================
--- development/source/tools/cConstSchedule.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cConstSchedule.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cConstSchedule.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "const_schedule.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cConstSchedule.h
===================================================================
--- development/source/tools/cConstSchedule.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cConstSchedule.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cConstSchedule.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "const_schedule.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cCountTracker.h
===================================================================
--- development/source/tools/cCountTracker.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cCountTracker.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,6 @@
  *  cCountTracker.h
  *  Avida
  *
- *  Created by David on 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cCycleCheck.cc
===================================================================
--- development/source/tools/cCycleCheck.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cCycleCheck.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,6 @@
  *  cCycleCheck.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2004 California Institute of Technology.
  *

Modified: development/source/tools/cCycleCheck.h
===================================================================
--- development/source/tools/cCycleCheck.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cCycleCheck.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,6 @@
  *  cCycleCheck.h
  *  Avida
  *
- *  Created by David on 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2004 California Institute of Technology.
  *

Modified: development/source/tools/cDataEntry.h
===================================================================
--- development/source/tools/cDataEntry.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDataEntry.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDataEntry.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "data_entry.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cDataFile.cc
===================================================================
--- development/source/tools/cDataFile.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDataFile.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDataFile.cc
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "data_file.cc" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cDataFile.h
===================================================================
--- development/source/tools/cDataFile.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDataFile.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDataFile.h
  *  Avida
  *
- *  Created by David on 12/2/05.
+ *  Called "data_file.hh" prior to 12/2/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology.
  *

Modified: development/source/tools/cDataFileManager.cc
===================================================================
--- development/source/tools/cDataFileManager.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDataFileManager.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDataFileManager.cc
  *  Avida
  *
- *  Created by David on 10/18/05.
+ *  Called "data_file_manager.cc" prior to 10/18/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2005 California Institute of Technology
  *

Modified: development/source/tools/cDataFileManager.h
===================================================================
--- development/source/tools/cDataFileManager.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDataFileManager.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDataFileManager.h
  *  Avida
  *
- *  Created by David on 10/18/05.
+ *  Called "data_file_manager.hh" prior to 10/18/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2005 California Institute of Technology
  *

Modified: development/source/tools/cDataManager_Base.cc
===================================================================
--- development/source/tools/cDataManager_Base.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDataManager_Base.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDataManager_Base.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "data_manager_base.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology
  *

Modified: development/source/tools/cDataManager_Base.h
===================================================================
--- development/source/tools/cDataManager_Base.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDataManager_Base.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDataManager_Base.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "data_manager_base.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cDefaultMessageDisplay.cc
===================================================================
--- development/source/tools/cDefaultMessageDisplay.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDefaultMessageDisplay.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDefaultMessageDisplay.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "default_message_display.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cDefaultMessageDisplay.h
===================================================================
--- development/source/tools/cDefaultMessageDisplay.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDefaultMessageDisplay.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDefaultMessageDisplay.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "default_message_display.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cDoubleSum.cc
===================================================================
--- development/source/tools/cDoubleSum.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDoubleSum.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDoubleSum.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "double_sum.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cDoubleSum.h
===================================================================
--- development/source/tools/cDoubleSum.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cDoubleSum.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cDoubleSum.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "double_sum.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cFile.h
===================================================================
--- development/source/tools/cFile.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cFile.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cFile.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "file.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cFixedBlock.h
===================================================================
--- development/source/tools/cFixedBlock.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cFixedBlock.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cFixedBlock.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "fixed_block.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cFixedCoords.h
===================================================================
--- development/source/tools/cFixedCoords.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cFixedCoords.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cFixedCoords.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "fixed_coords.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHelpAlias.cc
===================================================================
--- development/source/tools/cHelpAlias.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHelpAlias.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHelpAlias.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "help_alias.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHelpAlias.h
===================================================================
--- development/source/tools/cHelpAlias.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHelpAlias.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHelpAlias.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "help_alias.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHelpEntry.h
===================================================================
--- development/source/tools/cHelpEntry.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHelpEntry.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHelpEntry.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "help_entry.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHelpFullEntry.h
===================================================================
--- development/source/tools/cHelpFullEntry.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHelpFullEntry.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHelpFullEntry.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "help_full_type.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHelpManager.cc
===================================================================
--- development/source/tools/cHelpManager.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHelpManager.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHelpManager.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "help_manager.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHelpManager.h
===================================================================
--- development/source/tools/cHelpManager.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHelpManager.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHelpManager.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "help_manager.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHelpType.cc
===================================================================
--- development/source/tools/cHelpType.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHelpType.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHelpType.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "help_type.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHelpType.h
===================================================================
--- development/source/tools/cHelpType.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHelpType.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHelpType.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "help_type.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHistogram.cc
===================================================================
--- development/source/tools/cHistogram.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHistogram.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHistogram.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "histogram.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cHistogram.h
===================================================================
--- development/source/tools/cHistogram.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cHistogram.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cHistogram.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "histogram.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cID.h
===================================================================
--- development/source/tools/cID.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cID.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,6 @@
  *  cID.h
  *  Avida
  *
- *  Created by David on 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2004 California Institute of Technology
  *

Modified: development/source/tools/cIndexedBlockStruct.cc
===================================================================
--- development/source/tools/cIndexedBlockStruct.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cIndexedBlockStruct.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cIndexedBlockStruct.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "indexed_block_struct.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cIndexedBlockStruct.h
===================================================================
--- development/source/tools/cIndexedBlockStruct.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cIndexedBlockStruct.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cIndexedBlockStruct.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "indexed_block_struct.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cInitFile.cc
===================================================================
--- development/source/tools/cInitFile.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cInitFile.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInitFile.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "init_file.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cInitFile.h
===================================================================
--- development/source/tools/cInitFile.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cInitFile.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cInitFile.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "init_file.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cIntSum.cc
===================================================================
--- development/source/tools/cIntSum.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cIntSum.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cIntSum.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "int_sum.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cIntSum.h
===================================================================
--- development/source/tools/cIntSum.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cIntSum.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cIntSum.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "int_sum.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cIntegratedSchedule.cc
===================================================================
--- development/source/tools/cIntegratedSchedule.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cIntegratedSchedule.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cIntegratedSchedule.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "integrated_schedule.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cIntegratedSchedule.h
===================================================================
--- development/source/tools/cIntegratedSchedule.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cIntegratedSchedule.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cIntegratedSchedule.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "integrated_schedule.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cIntegratedScheduleNode.cc
===================================================================
--- development/source/tools/cIntegratedScheduleNode.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cIntegratedScheduleNode.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cIntegratedScheduleNode.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "integrated_schedule_node.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cIntegratedScheduleNode.h
===================================================================
--- development/source/tools/cIntegratedScheduleNode.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cIntegratedScheduleNode.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cIntegratedScheduleNode.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "integrated_schedule_node.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cMerit.cc
===================================================================
--- development/source/tools/cMerit.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cMerit.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMerit.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "merit.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology
  *

Modified: development/source/tools/cMerit.h
===================================================================
--- development/source/tools/cMerit.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cMerit.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMerit.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "merit.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cMessageClass.h
===================================================================
--- development/source/tools/cMessageClass.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cMessageClass.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMessageClass.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "message_class.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cMessageClosure.h
===================================================================
--- development/source/tools/cMessageClosure.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cMessageClosure.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMessageClosure.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "message_closure.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cMessageDisplay.cc
===================================================================
--- development/source/tools/cMessageDisplay.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cMessageDisplay.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMessageDisplay.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "message_display.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *
  */

Modified: development/source/tools/cMessageDisplay.h
===================================================================
--- development/source/tools/cMessageDisplay.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cMessageDisplay.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMessageDisplay.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "message_display.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *
  */

Modified: development/source/tools/cMessageDisplay_headers.h
===================================================================
--- development/source/tools/cMessageDisplay_headers.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cMessageDisplay_headers.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMessageDisplay_headers.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "message_display_headers.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *
  */

Modified: development/source/tools/cMessageType.h
===================================================================
--- development/source/tools/cMessageType.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cMessageType.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cMessageType.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "message_type.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cProbSchedule.cc
===================================================================
--- development/source/tools/cProbSchedule.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cProbSchedule.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cProbSchedule.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "prob_schedule.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cProbSchedule.h
===================================================================
--- development/source/tools/cProbSchedule.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cProbSchedule.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cProbSchedule.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "prob_schedule.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cRandom.cc
===================================================================
--- development/source/tools/cRandom.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cRandom.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cRandom.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "random.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2000 California Institute of Technology
  *

Modified: development/source/tools/cRandom.h
===================================================================
--- development/source/tools/cRandom.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cRandom.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cRandom.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "random.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2000 California Institute of Technology
  *

Modified: development/source/tools/cRefBlock.h
===================================================================
--- development/source/tools/cRefBlock.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cRefBlock.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cRefBlock.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "ref_block.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cRunningAverage.cc
===================================================================
--- development/source/tools/cRunningAverage.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cRunningAverage.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cRunningAverage.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "running_average.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cRunningAverage.h
===================================================================
--- development/source/tools/cRunningAverage.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cRunningAverage.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cRunningAverage.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "running_average.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cScaledBlock.h
===================================================================
--- development/source/tools/cScaledBlock.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cScaledBlock.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cScaledBlock.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "scaled_block.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cSchedule.cc
===================================================================
--- development/source/tools/cSchedule.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cSchedule.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSchedule.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "schedule.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cSchedule.h
===================================================================
--- development/source/tools/cSchedule.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cSchedule.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cSchedule.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "schedule.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cString.cc
===================================================================
--- development/source/tools/cString.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cString.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cString.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "string.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cString.h
===================================================================
--- development/source/tools/cString.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cString.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cString.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "string.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cStringIterator.cc
===================================================================
--- development/source/tools/cStringIterator.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cStringIterator.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cStringIterator.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "string_iterator.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cStringIterator.h
===================================================================
--- development/source/tools/cStringIterator.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cStringIterator.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cStringIterator.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "string_iterator.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cStringList.cc
===================================================================
--- development/source/tools/cStringList.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cStringList.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cStringList.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "string_list.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cStringList.h
===================================================================
--- development/source/tools/cStringList.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cStringList.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cStringList.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "string_list.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cStringUtil.cc
===================================================================
--- development/source/tools/cStringUtil.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cStringUtil.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cStringUtil.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "string_util.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cStringUtil.h
===================================================================
--- development/source/tools/cStringUtil.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cStringUtil.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cStringUtil.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "string_util.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cTools.cc
===================================================================
--- development/source/tools/cTools.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cTools.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTools.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tools.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2001 California Institute of Technology
  *

Modified: development/source/tools/cTools.h
===================================================================
--- development/source/tools/cTools.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cTools.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cTools.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tools.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cUInt.h
===================================================================
--- development/source/tools/cUInt.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cUInt.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cUInt.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "uint.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cVerifierSuiteRecurser.h
===================================================================
--- development/source/tools/cVerifierSuiteRecurser.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cVerifierSuiteRecurser.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,6 @@
  *  cVerifierSuiteRecurser.h
  *  Avida
  *
- *  Created by David on 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2004 California Institute of Technology
  *

Modified: development/source/tools/cWeightedIndex.cc
===================================================================
--- development/source/tools/cWeightedIndex.cc	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cWeightedIndex.cc	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cWeighedIndex.cc
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "weighted_index.cc" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/cWeightedIndex.h
===================================================================
--- development/source/tools/cWeightedIndex.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/cWeightedIndex.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  cWeightedIndex.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "weighted_index.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/functions.h
===================================================================
--- development/source/tools/functions.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/functions.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  functions.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "functions.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tArgDataEntry.h
===================================================================
--- development/source/tools/tArgDataEntry.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tArgDataEntry.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tArgDataEntry.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tArgDataEntry.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tArray.h
===================================================================
--- development/source/tools/tArray.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tArray.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tArray.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tArray.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tBuffer.h
===================================================================
--- development/source/tools/tBuffer.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tBuffer.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tBuffer.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tBuffer.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tDataEntry.h
===================================================================
--- development/source/tools/tDataEntry.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tDataEntry.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tDataEntry.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tDataEntry.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tDataEntryBase.h
===================================================================
--- development/source/tools/tDataEntryBase.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tDataEntryBase.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tDataEntryBase.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tDataEntryBase.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tDataEntryCommand.h
===================================================================
--- development/source/tools/tDataEntryCommand.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tDataEntryCommand.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tDataEntryCommand.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tDataEntryCommand.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tDataManager.h
===================================================================
--- development/source/tools/tDataManager.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tDataManager.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tDataManager.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tDataManager.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tDictionary.h
===================================================================
--- development/source/tools/tDictionary.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tDictionary.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tDictionary.h
  *  Avida
  *
- *  Created by David on 10/11/05.
+ *  Called "tDictionary.hh" prior to 10/11/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *
  */

Modified: development/source/tools/tHashTable.h
===================================================================
--- development/source/tools/tHashTable.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tHashTable.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,6 @@
  *  tHashTable.h
  *  Avida
  *
- *  Created by David on 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tList.h
===================================================================
--- development/source/tools/tList.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tList.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tList.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tList.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tMatrix.h
===================================================================
--- development/source/tools/tMatrix.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tMatrix.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tMatrix.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tMatrix.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tVector.h
===================================================================
--- development/source/tools/tVector.h	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tVector.h	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,7 @@
  *  tVector.h
  *  Avida
  *
- *  Created by David on 12/7/05.
+ *  Called "tVector.hh" prior to 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *

Modified: development/source/tools/tVerifierSuite.hh
===================================================================
--- development/source/tools/tVerifierSuite.hh	2006-08-23 17:42:42 UTC (rev 888)
+++ development/source/tools/tVerifierSuite.hh	2006-08-23 18:54:29 UTC (rev 889)
@@ -2,7 +2,6 @@
  *  tVerifierSuite.hh
  *  Avida
  *
- *  Created by David on 12/7/05.
  *  Copyright 2005-2006 Michigan State University. All rights reserved.
  *  Copyright 1993-2003 California Institute of Technology
  *




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