[Avida-cvs] [Avida2-svn] r76 - in trunk: . Avida2.xcode source
source/support
source/testsuites/functional_testsuites/default.md5sum
source/testsuites/functional_testsuites/default.tail
source/testsuites/functional_testsuites/default.tail.disabled
source/testsuites/functional_testsuites/tedious.tail.disabled
brysonda at myxo.css.msu.edu
brysonda at myxo.css.msu.edu
Mon Mar 28 08:08:05 PST 2005
Author: brysonda
Date: 2005-03-28 11:08:04 -0500 (Mon, 28 Mar 2005)
New Revision: 76
Modified:
trunk/Avida2.xcode/project.pbxproj
trunk/source/defs.hh
trunk/source/support/genesis
trunk/source/support/genesis.4stack
trunk/source/testsuites/functional_testsuites/default.md5sum/genesis
trunk/source/testsuites/functional_testsuites/default.tail.disabled/genesis
trunk/source/testsuites/functional_testsuites/default.tail/genesis
trunk/source/testsuites/functional_testsuites/tedious.tail.disabled/genesis
trunk/status.xml
Log:
Prepare repository for 2.3.0 development release. Updated status.xml with all changes since 2.2.2. Removed stale file links in the Avida2 Xcode project. Updated genesis files' version number to reflect 2.3.0.
Modified: trunk/Avida2.xcode/project.pbxproj
===================================================================
--- trunk/Avida2.xcode/project.pbxproj 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/Avida2.xcode/project.pbxproj 2005-03-28 16:08:04 UTC (rev 76)
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Modified: trunk/source/defs.hh
===================================================================
--- trunk/source/defs.hh 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/source/defs.hh 2005-03-28 16:08:04 UTC (rev 76)
@@ -75,7 +75,7 @@
// the macro VERSION is defined by automake (in the file 'configure.in' in
// the top-level directory).
#ifndef VERSION
- #define VERSION "2.2.1"
+ #define VERSION "2.3.0"
#endif
#define AVIDA_VERSION VERSION
Modified: trunk/source/support/genesis
===================================================================
--- trunk/source/support/genesis 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/source/support/genesis 2005-03-28 16:08:04 UTC (rev 76)
@@ -3,7 +3,7 @@
# For more information, see doc/genesis.html
#############################################################################
-VERSION_ID 2.2.1 # Do not change this value!
+VERSION_ID 2.3.0 # Do not change this value!
### Architecture Variables ###
MAX_UPDATES -1 # Maximum updates to run simulation (-1 = no limit)
Modified: trunk/source/support/genesis.4stack
===================================================================
--- trunk/source/support/genesis.4stack 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/source/support/genesis.4stack 2005-03-28 16:08:04 UTC (rev 76)
@@ -3,7 +3,7 @@
# For more information, see doc/genesis.html
#############################################################################
-VERSION_ID 2.2.1 # Do not change this value!
+VERSION_ID 2.3.0 # Do not change this value!
### Architecture Variables ###
MAX_UPDATES -1 # Maximum updates to run simulation (-1 = no limit)
Modified: trunk/source/testsuites/functional_testsuites/default.md5sum/genesis
===================================================================
--- trunk/source/testsuites/functional_testsuites/default.md5sum/genesis 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/source/testsuites/functional_testsuites/default.md5sum/genesis 2005-03-28 16:08:04 UTC (rev 76)
@@ -3,7 +3,7 @@
# For more information, see doc/genesis.html
#############################################################################
-VERSION_ID 2.0b7 # Do not change this value!
+VERSION_ID 2.3.0 # Do not change this value!
### Architecture Variables ###
MAX_UPDATES -1 # Maximum updates to run simulation (-1 = no limit)
Modified: trunk/source/testsuites/functional_testsuites/default.tail/genesis
===================================================================
--- trunk/source/testsuites/functional_testsuites/default.tail/genesis 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/source/testsuites/functional_testsuites/default.tail/genesis 2005-03-28 16:08:04 UTC (rev 76)
@@ -3,7 +3,7 @@
# For more information, see doc/genesis.html
#############################################################################
-VERSION_ID 2.0b7 # Do not change this value!
+VERSION_ID 2.3.0 # Do not change this value!
### Architecture Variables ###
MAX_UPDATES -1 # Maximum updates to run simulation (-1 = no limit)
Modified: trunk/source/testsuites/functional_testsuites/default.tail.disabled/genesis
===================================================================
--- trunk/source/testsuites/functional_testsuites/default.tail.disabled/genesis 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/source/testsuites/functional_testsuites/default.tail.disabled/genesis 2005-03-28 16:08:04 UTC (rev 76)
@@ -3,7 +3,7 @@
# For more information, see doc/genesis.html
#############################################################################
-VERSION_ID 2.0b7 # Do not change this value!
+VERSION_ID 2.3.0 # Do not change this value!
### Architecture Variables ###
MAX_UPDATES -1 # Maximum updates to run simulation (-1 = no limit)
Modified: trunk/source/testsuites/functional_testsuites/tedious.tail.disabled/genesis
===================================================================
--- trunk/source/testsuites/functional_testsuites/tedious.tail.disabled/genesis 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/source/testsuites/functional_testsuites/tedious.tail.disabled/genesis 2005-03-28 16:08:04 UTC (rev 76)
@@ -3,7 +3,7 @@
# For more information, see doc/genesis.html
#############################################################################
-VERSION_ID 2.0b7 # Do not change this value!
+VERSION_ID 2.3.0 # Do not change this value!
### Architecture Variables ###
MAX_UPDATES -1 # Maximum updates to run simulation (-1 = no limit)
Modified: trunk/status.xml
===================================================================
--- trunk/status.xml 2005-03-25 19:38:59 UTC (rev 75)
+++ trunk/status.xml 2005-03-28 16:08:04 UTC (rev 76)
@@ -19,13 +19,105 @@
<developers>
<person name="Brian Baer" email="baerb at msu.edu" id="BDB" />
<person name="David Bryson" email="brysonda at msu.edu" id="DMB" />
+ <person name="Jeff Clune" email="jclune at msu.edu" id="JMC" />
<person name="Dusan Misevic" email="" id="DM" />
<person name="Kaben Nanlohy" email="" id="KGN" />
<person name="Charles Ofria" email="ofria at cse.msu.edu" id="CAO" />
</developers>
<changes>
+ <!-- Some action types have associated images. By default, images are
+ defined for 'add', 'fix', 'remove', 'update' and 'hack'. If you add
+ src/documentation/resources/images/<foo>.jpg images, these will
+ automatically be used for entries of type <foo>. -->
+
<!-- Add new releases here -->
+
+ <release version="2.3.0 (r76) date="28 March 2005">
+ <action dev="CAO" type="fix" context="feature">
+ Fixed the output of <code>print_genotypes</code> event. It was
+ double-printing all historic genotypes with different formats (ick.)
+ </action>
+ <action dev="KGN" type="remove" context="AvidaED">
+ Removed python files that are supposed to be autogenerated.
+ </action>
+ <action dev="KGN" type="remove" context="AvidaED">
+ Removed obsolete python and pyuic files.
+ </action>
+ <action dev="KGN" type="update" context="AvidaED">
+ Moved AvidaED python files into source/python
+ </action>
+ <action dev="KGN" type="add" context="AvidaED">
+ Added scripts to build OS X application. AvidaED.app on OS X can be
+ launched from command line for an interactive interpreter, or by
+ double-clicking on its icon in the finder.
+ </action>
+ <action dev="KGN" type="fix" context="AvidaED">
+ Fixed bad build rule prevent build of AvidaED/Mac.
+ </action>
+ <action dev="KGN" type="update" context="AvidaED">
+ AvidaED no longer starts an Avida Session at launch time. Instead
+ an Avida object can be created after launch time using the sequence
+ of commands (without semi-colons):
+ <code>avida = pyAvida(); avida.construct(genesis);</code>
+ </action>
+ <action dev="KGN" type="add" context="AvidaED">
+ Added an AvidaED Xcode project for editing files.
+ </action>
+ <action dev="KGN" type="update" context="AvidaED">
+ Added pyuic build target to AvidaED Xcode project. Organized python
+ files into sensible groups.
+ </action>
+ <action dev="BDB" type="fix" context="AvidaED">
+ Fixed layout problems with <code>OnePop_PetriDishView</code>.
+ </action>
+ <action dev="BDB" type="add" context="AvidaED">
+ Added code to call routine to read freezer items.
+ </action>
+ <action dev="BDB" type="update" context="AvidaED">
+ Set <code>pyPetriConfigureView</code> to capture start signal.
+ </action>
+ <action dev="BDB" type="add" context="AvidaED">
+ Added code to write files into the freezer directory.
+ </action>
+ <action dev="BDB" type="add" context="AvidaED">
+ Added code to read default Genesis file, change values that have been
+ modified by user in the PetriConfiguration screen, and write a new
+ Genesis file into the working directory. Also copies the event,
+ environment and organism file to working directory.
+ </action>
+ <action dev="BDB" type="add" context="AvidaED">
+ Added new reload commands for recently added classes.
+ </action>
+ <action dev="BDB" type="add" context="AvidaED">
+ Added signal support for the start button. Activated the start button.
+ </action>
+ <action dev="BDB" type="add" context="AvidaED">
+ Added signals to support freezing a populated petri dish. Added
+ <code>extractPopulationSlot<code> to send all organisms in population
+ to be frozen.
+ </action>
+ <action dev="CAO" type="add" context="core">
+ Added in <code>sense</code> instruction into <code>hardware_cpu</code>
+ </action>
+ <action dev="KGN" type="fix" context="AvidaED">
+ Population graphing works again.
+ </action>
+ <action dev="JMC" type="add" context="AvidaED">
+ Added statistics code to support population information and actual
+ graphing support.
+ </action>
+ <action dev="BDB" type="update" context="AvidaED">
+ Changed the look of various AvidaED windows.
+ </action>
+ <action dev="BDB" type="add" context="AvidaED">
+ Added a utility that will check all <code>.ui</code> files and find
+ ones that are newer than their equivalent <code>*.py</code> files.
+ The program will then offer the user the chance to create the
+ <code>.py</code> file. User may need to change the command line
+ to reflect the location of the <code>pyuic</code> program.
+ </action>
+ </release>
<release version="2.2.2 (r27) date="24 February 2005">
<action dev="KGN" type="add" context="documentation">
Added build instructions for third-party development software
@@ -62,11 +154,6 @@
</action>
</release>
<release version="2.2 (r12)" date="14 February 2005">
- <!-- Some action types have associated images. By default, images are
- defined for 'add', 'fix', 'remove', 'update' and 'hack'. If you add
- src/documentation/resources/images/<foo>.jpg images, these will
- automatically be used for entries of type <foo>. -->
-
<action dev="DMB" type="add" context="admin">
Initial Subversion Import
</action>
@@ -78,7 +165,7 @@
</action>
<action dev="DM" type="fix" context="feature">
Minor modification to RECOMBINE comman in the analyze mode.
- A for loop was doing one less iterration that it shoud have
+ A for loop was doing one less iteration that it shoud have
resulting in creation of 2 less recombinant genomes.
</action>
<action dev="DM" type="add" context="feature">
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