[avida-cvs] avida CVS commits: /current NEWS /current/source modules.pri

[kaben]

kaben		Wed Oct 15 21:33:05 2003 EDT

  Modified files:              
    /avida/current	NEWS 
    /avida/current/source	modules.pri 
  Log:
  
  Updated NEWS file.
  
  
  
Index: avida/current/NEWS
diff -u avida/current/NEWS:1.26 avida/current/NEWS:1.27
--- avida/current/NEWS:1.26	Fri Oct  3 14:48:15 2003
+++ avida/current/NEWS	Wed Oct 15 21:33:04 2003
@@ -4,6 +4,53 @@
 [B] = Bug fix; something that used to work wrong will now be correct.
 [M] = Major change; avida will function differently in certain circumstances.
 
+For version 2.0 beta 7:
+
+October, 03
+[F] Implemented proportional merit with sex...
+
+[F] Setup environment file with an extra command:
+
+      SET_ACTIVE <type> <name> <active=true>
+
+    Type can currently only be "reaction" (but soon I'll also get resources
+    working, and eventually mutations).  Name is the name of the resource,
+    and fitnally a true or false if you want that reaction turned on.
+  
+    THEN I also added a command to the analyze mode called "ENVIRONMENT"
+    which will allow you to add extra commands to define the environment
+    file on the fly.  For example, the analyze command:
+  
+      ENVIRONMENT SET_ACTIVE reaction NOT false
+  
+    Will turn off rewards for not.  They can be turned back on again
+    trivially with:
+  
+      ENVIRONMENT SET_ACTIVE reaction NOT true
+
+[B] Made changes to arrays in analyze mode so that they use tArray and
+    tMatrix to make them easier to use with variable sizes.
+
+[F] Added new functions "AnalyzeComplexity" and "AnalyzePopComplexity"
+    to analyze source code.
+
+[F] Added in three new events to modify the topology of a population:
+    sever_column : sever a full column of cells
+    connect_cells : connect two cells together
+    disconnect_cells : disconnect two cells from each other.
+
+[F] Added some info about the new AVERAGE_MODULARITY analyze command to
+    the documentation files.
+
+[F] After much tweaking, implemented a new analyze function,
+    AVERAGE_MODULARITY.
+    Usage:
+    AVERAGE_MODULARITY output_file task.0 task.1 task.2 task.3 task.4 task.5 task.6 task.7 task.8
+
+[B] Fixed the formula used to calculate Standard Error in various
+    statistics parameters.
+
+
 For version 2.0 beta 6:
 
 September, 03
Index: avida/current/source/modules.pri
diff -u avida/current/source/modules.pri:1.4 avida/current/source/modules.pri:1.5
--- avida/current/source/modules.pri:1.4	Wed Oct 15 19:59:20 2003
+++ avida/current/source/modules.pri	Wed Oct 15 21:33:04 2003
@@ -26,6 +26,7 @@
 DEPENDPATH += ;.
 
 INCLUDEPATH += $$DEPENDPATH
+QMAKE_CXXFLAGS += -I.
 
 include($$CPU_CC/cpu.pri)
 include($$EVENT_CC/event.pri)